Literature DB >> 34061026

Science Forum: The critical importance of vouchers in genomics.

Janet C Buckner1, Robert C Sanders1, Brant C Faircloth2, Prosanta Chakrabarty1.   

Abstract

A voucher is a permanently preserved specimen that is maintained in an accessible collection. In genomics, vouchers serve as the physical evidence for the taxonomic identification of genome assemblies. Unfortunately, the vast majority of vertebrate genomes stored in the Genbank database do not refer to voucher specimens. Here, we urge researchers generating new genome assemblies to deposit voucher specimens in accessible, permanent research collections, and to link these vouchers to publications, public databases, and repositories. We also encourage scientists to deposit voucher specimens in order to recognize the work of local field biologists and promote a diverse and inclusive knowledge base, and we recommend best practices to in voucher deposition to prevent taxonomic errors and ensure reproducibility and legality in genetic studies.
© 2021, Buckner et al.

Entities:  

Keywords:  genetics; genomics; none

Year:  2021        PMID: 34061026     DOI: 10.7554/eLife.68264

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  8 in total

1.  Bridging the Research Gap between Live Collections in Zoos and Preserved Collections in Natural History Museums.

Authors:  Sinlan Poo; Steven M Whitfield; Alexander Shepack; Gregory J Watkins-Colwell; Gil Nelson; Jillian Goodwin; Allison Bogisich; Patricia L R Brennan; Jennifer D'Agostino; Michelle S Koo; Joseph R Mendelson; Rebecca Snyder; Sandra Wilson; Gary P Aronsen; Andrew C Bentley; David C Blackburn; Matthew R Borths; Mariel L Campbell; Dalia A Conde; Joseph A Cook; Juan D Daza; Daniel P Dembiec; Jonathan L Dunnum; Catherine M Early; Adam W Ferguson; Amanda Greene; Robert Guralnick; Courtney Janney; Debbie Johnson; Felicia Knightly; Stephane Poulin; Luiz Rocha; Pamela S Soltis; Barbara Thiers; Prosanta Chakrabarty
Journal:  Bioscience       Date:  2022-04-21       Impact factor: 11.566

2.  Toward a genome sequence for every animal: Where are we now?

Authors:  Scott Hotaling; Joanna L Kelley; Paul B Frandsen
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-28       Impact factor: 11.205

3.  A reference genome for the nectar-robbing Black-throated Flowerpiercer (Diglossa brunneiventris).

Authors:  Anna E Hiller; Robb T Brumfield; Brant C Faircloth
Journal:  G3 (Bethesda)       Date:  2021-10-19       Impact factor: 3.154

4.  A set of principles and practical suggestions for equitable fieldwork in biology.

Authors:  Valeria Ramírez-Castañeda; Erin P Westeen; Jeffrey Frederick; Sina Amini; Daniel R Wait; Anang S Achmadi; Noviar Andayani; Evy Arida; Umilaela Arifin; Moisés A Bernal; Elisa Bonaccorso; Marites Bonachita Sanguila; Rafe M Brown; Jing Che; F Peter Condori; Diny Hartiningtias; Anna E Hiller; Djoko T Iskandar; Rosa Alicia Jiménez; Rassim Khelifa; Roberto Márquez; José G Martínez-Fonseca; Juan L Parra; Joshua V Peñalba; Lina Pinto-García; Onja H Razafindratsima; Santiago R Ron; Sara Souza; Jatna Supriatna; Rauri C K Bowie; Carla Cicero; Jimmy A McGuire; Rebecca D Tarvin
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-16       Impact factor: 12.779

Review 5.  Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet.

Authors:  Alex R Hardisty; Elizabeth R Ellwood; Gil Nelson; Breda Zimkus; Jutta Buschbom; Wouter Addink; Richard K Rabeler; John Bates; Andrew Bentley; José A B Fortes; Sara Hansen; James A Macklin; Austin R Mast; Joseph T Miller; Anna K Monfils; Deborah L Paul; Elycia Wallis; Michael Webster
Journal:  Bioscience       Date:  2022-08-03       Impact factor: 11.566

6.  Benefit sharing: Why inclusive provenance metadata matter.

Authors:  Jacob Golan; KatieLee Riddle; Maui Hudson; Jane Anderson; Natalie Kusabs; Tim Coltman
Journal:  Front Genet       Date:  2022-09-21       Impact factor: 4.772

7.  Ethical, legal, and social issues in the Earth BioGenome Project.

Authors:  Jacob S Sherkow; Katharine B Barker; Irus Braverman; Robert Cook-Deegan; Richard Durbin; Carla L Easter; Melissa M Goldstein; Maui Hudson; W John Kress; Harris A Lewin; Debra J H Mathews; Catherine McCarthy; Ann M McCartney; Manuela da Silva; Andrew W Torrance; Henry T Greely
Journal:  Proc Natl Acad Sci U S A       Date:  2022-01-25       Impact factor: 11.205

Review 8.  The Evolution of Comparative Phylogeography: Putting the Geography (and More) into Comparative Population Genomics.

Authors:  Scott V Edwards; V V Robin; Nuno Ferrand; Craig Moritz
Journal:  Genome Biol Evol       Date:  2022-01-04       Impact factor: 3.416

  8 in total

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