Literature DB >> 34059289

The application of Poisson distribution statistics in ion channel reconstitution to determine oligomeric architecture.

Randy B Stockbridge1.   

Abstract

During reconstitution, membrane proteins are randomly inserted into liposomes according to Poisson distribution statistics. When the protein to lipid ratios in the reconstitution mixture are varied systematically, the characteristics of this statistical capture permit inferences about the proteins themselves, such as the number of subunits that assemble into a single functional unit. This chapter describes the Poisson distribution as applied to the reconstitution of membrane proteins into proteoliposomes and focuses on an application whereby this statistical behavior is used to determine the number of ion channel subunits that assemble into a functional pore. Practical considerations for performing these experiments are emphasized. Harnessing Poisson dilution statistics provides a function-based method to determine ion channel oligomerization, complementing other biophysical, biochemical, or structural approaches.
© 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Ion channel; Liposome; Membrane transport; Oligomerization; Poisson distribution; Reconstitution; Statistical capture

Mesh:

Substances:

Year:  2021        PMID: 34059289      PMCID: PMC9016494          DOI: 10.1016/bs.mie.2021.02.018

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.682


  27 in total

1.  Solubilization and functional reconstitution of a chloride channel from Torpedo californica electroplax.

Authors:  A F Goldberg; C Miller
Journal:  J Membr Biol       Date:  1991-12       Impact factor: 1.843

2.  A Proteoliposome-Based Efflux Assay to Determine Single-molecule Properties of Cl- Channels and Transporters.

Authors:  Daniel Basilio; Alessio Accardi
Journal:  J Vis Exp       Date:  2015-04-20       Impact factor: 1.355

3.  Functional reconstitution of a prokaryotic K+ channel.

Authors:  L Heginbotham; L Kolmakova-Partensky; C Miller
Journal:  J Gen Physiol       Date:  1998-06       Impact factor: 4.086

4.  The dimerization equilibrium of a ClC Cl(-)/H(+) antiporter in lipid bilayers.

Authors:  Rahul Chadda; Venkatramanan Krishnamani; Kacey Mersch; Jason Wong; Marley Brimberry; Ankita Chadda; Ludmila Kolmakova-Partensky; Larry J Friedman; Jeff Gelles; Janice L Robertson
Journal:  Elife       Date:  2016-08-03       Impact factor: 8.140

5.  Measuring Membrane Protein Dimerization Equilibrium in Lipid Bilayers by Single-Molecule Fluorescence Microscopy.

Authors:  R Chadda; J L Robertson
Journal:  Methods Enzymol       Date:  2016-10-11       Impact factor: 1.600

6.  Occupancy distributions of membrane proteins in heterogeneous liposome populations.

Authors:  Lucy Cliff; Rahul Chadda; Janice L Robertson
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-08-05       Impact factor: 3.747

7.  Uncoupling and turnover in a Cl-/H+ exchange transporter.

Authors:  Michael Walden; Alessio Accardi; Fang Wu; Chen Xu; Carole Williams; Christopher Miller
Journal:  J Gen Physiol       Date:  2007-04       Impact factor: 4.086

8.  Purified TMEM16A is sufficient to form Ca2+-activated Cl- channels.

Authors:  Hiroyuki Terashima; Alessandra Picollo; Alessio Accardi
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

9.  A family of fluoride-specific ion channels with dual-topology architecture.

Authors:  Randy B Stockbridge; Janice L Robertson; Ludmila Kolmakova-Partensky; Christopher Miller
Journal:  Elife       Date:  2013-08-27       Impact factor: 8.140

10.  Cork-in-Bottle Occlusion of Fluoride Ion Channels by Crystallization Chaperones.

Authors:  Benjamin C McIlwain; Simon Newstead; Randy B Stockbridge
Journal:  Structure       Date:  2018-03-08       Impact factor: 5.006

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