Literature DB >> 3405751

Identification of regions essential for extrachromosomal replication and maintenance of an endogenous plasmid in Dictyostelium.

K G Ahern1, P K Howard, R A Firtel.   

Abstract

Initial experiments with the endogenous 12.3 kb Dictyostelium discoideum plasmid Ddp1 led to the generation of a large shuttle vector, Ddp1-20. In addition to Ddp1, this vector contains pBR322 and a gene fusion that confers G418 resistance in Dictyostelium cells. We have shown that Ddp1-20 replicates extrachromosomally in Dictyostelium cells and can be grown in Escherichia coli cells (1). We have now examined deletions within this vector to identify the elements essential for extrachromosomal replication and stable maintenance of the plasmid. We find that a 2.2 kb fragment is sufficient to confer stable, extrachromosomal replication with a reduction in copy number from about 40 to approximately 10-15 copies per cell. Vectors containing additional Ddp1 sequences have a higher copy number. The 2.2 kb region contains none of the complete, previously identified transcription units on Ddp1 expressed during vegetative growth or development. These results suggest that gene products expressed by Ddp1 are not essential for replication, stability, or partitioning of the plasmid between daughter cells. Vectors carrying only the 2.2 kb fragment plus the gene fusion conferring G418 resistance transform Dictyostelium cells with high efficiency using either calcium phosphate mediated transformation or electroporation. Finally, we have examined the relative levels of expression of actin promoters driving neoR genes when in extrachromosomal or integrating vectors.

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Year:  1988        PMID: 3405751      PMCID: PMC338336          DOI: 10.1093/nar/16.14.6825

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  35 in total

1.  Autoregulation of 2 micron circle gene expression provides a model for maintenance of stable plasmid copy levels.

Authors:  T Som; K A Armstrong; F C Volkert; J R Broach
Journal:  Cell       Date:  1988-01-15       Impact factor: 41.582

2.  Organization of the ribosomal RNA genes of Dictyostelium discoideum. Mapping of the transcribed region.

Authors:  G Frankel; A F Cockburn; K L Kindle; R A Firtel
Journal:  J Mol Biol       Date:  1977-02-05       Impact factor: 5.469

3.  Presence of nuclear associated plasmids in the lower eukaryote Dictyostelium discoideum.

Authors:  A Noegel; D L Welker; B A Metz; K L Williams
Journal:  J Mol Biol       Date:  1985-09-20       Impact factor: 5.469

4.  A new type of plasmid from a wild isolate of Dictyostelium species: the existence of closely situated long inverted repeats.

Authors:  H Orii; K Suzuki; Y Tanaka; K Yanagisawa
Journal:  Nucleic Acids Res       Date:  1987-02-11       Impact factor: 16.971

5.  Conserved structural features are found upstream from the three co-ordinately regulated discoidin I genes of Dictyostelium discoideum.

Authors:  S J Poole; R A Firtel
Journal:  J Mol Biol       Date:  1984-01-15       Impact factor: 5.469

6.  DNA-mediated transformation in Dictyostelium discoideum: regulated expression of an actin gene fusion.

Authors:  W Nellen; C Silan; R A Firtel
Journal:  Mol Cell Biol       Date:  1984-12       Impact factor: 4.272

7.  Yeast plasmid requires a cis-acting locus and two plasmid proteins for its stable maintenance.

Authors:  Y Kikuchi
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

8.  DNA sequences required for expression of a Dictyostelium actin gene.

Authors:  S M Cohen; D Knecht; H F Lodish; W F Loomis
Journal:  EMBO J       Date:  1986-12-01       Impact factor: 11.598

9.  Homologous recombination in the Dictyostelium alpha-actinin gene leads to an altered mRNA and lack of the protein.

Authors:  W Witke; W Nellen; A Noegel
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

10.  Regulatory sequences in the promoter of the Dictyostelium Actin 6 gene.

Authors:  W Nellen; C Silan; U Saur; R A Firtel
Journal:  EMBO J       Date:  1986-12-01       Impact factor: 11.598

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  13 in total

1.  DdPK3, which plays essential roles during Dictyostelium development, encodes the catalytic subunit of cAMP-dependent protein kinase.

Authors:  S K Mann; W M Yonemoto; S S Taylor; R A Firtel
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

2.  Sequence organization and gene expression of pGD1, a plasmid found in a wild isolate of Dictyostelium.

Authors:  H Orii; Y Tanaka; K Yanagisawa
Journal:  Nucleic Acids Res       Date:  1989-02-25       Impact factor: 16.971

3.  Molecular complementation of a genetic marker in Dictyostelium using a genomic DNA library.

Authors:  J L Dynes; R A Firtel
Journal:  Proc Natl Acad Sci U S A       Date:  1989-10       Impact factor: 11.205

4.  The replication origin position and its relationship to a negative trans-acting transcription regulator encoded by Dictyostelium discoideum nuclear plasmid Ddp1.

Authors:  H Kiyosawa; J E Hughes; D L Welker
Journal:  Curr Genet       Date:  1995-04       Impact factor: 3.886

5.  Plasmid maintenance functions encoded on Dictyostelium discoideum nuclear plasmid Ddp1.

Authors:  J E Hughes; H Kiyosawa; D L Welker
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

6.  Replication initiates at multiple dispersed sites in the ribosomal DNA plasmid of the protozoan parasite Entamoeba histolytica.

Authors:  S K Dhar; N R Choudhury; V Mittal; A Bhattacharya; S Bhattacharya
Journal:  Mol Cell Biol       Date:  1996-05       Impact factor: 4.272

7.  Spatial and temporal expression of the Dictyostelium discoideum G alpha protein subunit G alpha 2: expression of a dominant negative protein inhibits proper prestalk to stalk differentiation.

Authors:  F Carrel; S Dharmawardhane; A M Clark; J A Powell-Coffman; R A Firtel
Journal:  Mol Biol Cell       Date:  1994-01       Impact factor: 4.138

8.  Transcript and sequence analysis of a 5.1 kb contiguous fragment of Dictyostelium discoideum plasmid Ddp1 that contains the origin of replication and codes for several transcripts.

Authors:  C B Gurniak; A G Bang; A A Noegel
Journal:  Curr Genet       Date:  1990-04       Impact factor: 3.886

9.  Amino acid substitutions in the Dictyostelium G alpha subunit G alpha 2 produce dominant negative phenotypes and inhibit the activation of adenylyl cyclase, guanylyl cyclase, and phospholipase C.

Authors:  K Okaichi; A B Cubitt; G S Pitt; R A Firtel
Journal:  Mol Biol Cell       Date:  1992-07       Impact factor: 4.138

10.  Expression of human antithrombin III in the cellular slime mould Dictyostelium discoideum.

Authors:  T Dingermann; E M Troidl; M Bröker; K Nerke
Journal:  Appl Microbiol Biotechnol       Date:  1991-07       Impact factor: 4.813

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