Literature DB >> 34057028

Interrelationship between miRNA and splicing factors in pancreatic ductal adenocarcinoma.

I Gede Putu Supadmanaba1,2, Giulia Mantini1,3, Ornella Randazzo1,4, Mjriam Capula3,5, Ittai B Muller6, Stella Cascioferro4, Patrizia Diana4, Godefridus J Peters1,7, Elisa Giovannetti1,3.   

Abstract

Pancreatic ductal adenocarcinoma (PDAC) is one of the most lethal cancers because of diagnosis at late stage and inherent/acquired chemoresistance. Recent advances in genomic profiling and biology of this disease have not yet been translated to a relevant improvement in terms of disease management and patient's survival. However, new possibilities for treatment may emerge from studies on key epigenetic factors. Deregulation of microRNA (miRNA) dependent gene expression and mRNA splicing are epigenetic processes that modulate the protein repertoire at the transcriptional level. These processes affect all aspects of PDAC pathogenesis and have great potential to unravel new therapeutic targets and/or biomarkers. Remarkably, several studies showed that they actually interact with each other in influencing PDAC progression. Some splicing factors directly interact with specific miRNAs and either facilitate or inhibit their expression, such as Rbfox2, which cleaves the well-known oncogenic miRNA miR-21. Conversely, miR-15a-5p and miR-25-3p significantly downregulate the splicing factor hnRNPA1 which acts also as a tumour suppressor gene and is involved in processing of miR-18a, which in turn, is a negative regulator of KRAS expression. Therefore, this review describes the interaction between splicing and miRNA, as well as bioinformatic tools to explore the effect of splicing modulation towards miRNA profiles, in order to exploit this interplay for the development of innovative treatments. Targeting aberrant splicing and deregulated miRNA, alone or in combination, may hopefully provide novel therapeutic approaches to fight the complex biology and the common treatment recalcitrance of PDAC.

Entities:  

Keywords:  PDAC; interaction; miRNA; splicing deregulation; splicing modulation

Mesh:

Substances:

Year:  2021        PMID: 34057028      PMCID: PMC8993068          DOI: 10.1080/15592294.2021.1916697

Source DB:  PubMed          Journal:  Epigenetics        ISSN: 1559-2294            Impact factor:   4.528


  175 in total

1.  MicroRNA expression profiles associated with pancreatic adenocarcinoma and ampullary adenocarcinoma.

Authors:  Nicolai A Schultz; Jens Werner; Hanni Willenbrock; Anne Roslind; Nathalia Giese; Thomas Horn; Morten Wøjdemann; Julia S Johansen
Journal:  Mod Pathol       Date:  2012-08-10       Impact factor: 7.842

2.  The RNA-binding protein Rbfox2: an essential regulator of EMT-driven alternative splicing and a mediator of cellular invasion.

Authors:  C Braeutigam; L Rago; A Rolke; L Waldmeier; G Christofori; J Winter
Journal:  Oncogene       Date:  2013-02-25       Impact factor: 9.867

3.  MicroRNA-127 is aberrantly downregulated and acted as a functional tumor suppressor in human pancreatic cancer.

Authors:  Yuan Yu; Lei Liu; Ruirui Ma; Haibing Gong; Ping Xu; Congjun Wang
Journal:  Tumour Biol       Date:  2016-08-29

4.  Insights into the Role of microRNAs in Pancreatic Cancer Pathogenesis: Potential for Diagnosis, Prognosis, and Therapy.

Authors:  Mohammad Aslam Khan; Haseeb Zubair; Sanjeev Kumar Srivastava; Seema Singh; Ajay Pratap Singh
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

5.  MicroRNA dynamics in the stages of tumorigenesis correlate with hallmark capabilities of cancer.

Authors:  Peter Olson; Jun Lu; Hao Zhang; Anny Shai; Matthew G Chun; Yucheng Wang; Steven K Libutti; Eric K Nakakura; Todd R Golub; Douglas Hanahan
Journal:  Genes Dev       Date:  2009-09-15       Impact factor: 11.361

6.  Identification of recurrent regulated alternative splicing events across human solid tumors.

Authors:  Miri Danan-Gotthold; Regina Golan-Gerstl; Eli Eisenberg; Keren Meir; Rotem Karni; Erez Y Levanon
Journal:  Nucleic Acids Res       Date:  2015-04-23       Impact factor: 16.971

7.  miRBase: from microRNA sequences to function.

Authors:  Ana Kozomara; Maria Birgaoanu; Sam Griffiths-Jones
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

Review 8.  Fox-1 family of RNA-binding proteins.

Authors:  Hidehito Kuroyanagi
Journal:  Cell Mol Life Sci       Date:  2009-12       Impact factor: 9.261

9.  Associating transcription factor-binding site motifs with target GO terms and target genes.

Authors:  Mikael Bodén; Timothy L Bailey
Journal:  Nucleic Acids Res       Date:  2008-06-10       Impact factor: 16.971

10.  Targeted inhibition of oncogenic miR-21 maturation with designed RNA-binding proteins.

Authors:  Yu Chen; Fan Yang; Lorena Zubovic; Tom Pavelitz; Wen Yang; Katherine Godin; Matthew Walker; Suxin Zheng; Paolo Macchi; Gabriele Varani
Journal:  Nat Chem Biol       Date:  2016-07-18       Impact factor: 15.040

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  2 in total

1.  SF3B1 modulators affect key genes in metastasis and drug influx: a new approach to fight pancreatic cancer chemoresistance.

Authors:  Ornella Randazzo; Stella M Cascioferro; Camilla Pecoraro; Widad Ait Iddouch; Amir Avan; Barbara Parrino; Daniela Carbone; Ugo Perricone; Godefridus J Peters; Patrizia Diana; Elisa Giovannetti
Journal:  Cancer Drug Resist       Date:  2021-10-08

Review 2.  MicroRNA and Alternative mRNA Splicing Events in Cancer Drug Response/Resistance: Potent Therapeutic Targets.

Authors:  Rahaba Marima; Flavia Zita Francies; Rodney Hull; Thulo Molefi; Meryl Oyomno; Richard Khanyile; Sikhumbuzo Mbatha; Mzubanzi Mabongo; David Owen Bates; Zodwa Dlamini
Journal:  Biomedicines       Date:  2021-12-02
  2 in total

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