| Literature DB >> 34055663 |
Li Zhang1, Wen-Juan Kang1, Lei Zhu1, Li-Jun Xu1, Chao Guo1, Xin-Hua Zhang2, Qing-Hua Liu3, Lan Ma1.
Abstract
Background: Group B streptococcus (GBS) is a leading cause of serious infections in infants. The extensive use of tetracycline has led to the selection of specific resistant and infectious GBS clones. The sequence type (ST) 10 GBS strain, causing invasive infections in infants, is becoming prevalent in China. We aimed to understand the clinical and microbiological characteristics of this GBS strain.Entities:
Keywords: group B streptococcus; infants; late-onset disease; meningitis; tetracycline
Year: 2021 PMID: 34055663 PMCID: PMC8162377 DOI: 10.3389/fcimb.2021.642455
Source DB: PubMed Journal: Front Cell Infect Microbiol ISSN: 2235-2988 Impact factor: 5.293
The primers used in the resistance and surface protein genes test and their reference.
| Genes | Primer | Sequence (5′ to 3′) | Ref./isolate/ID |
|---|---|---|---|
| alpha and alpha-like surface protein genes | Forward | TGATACTTCACAGACGAAACAACG |
|
| alpha C-R | TACATGTGGTAGTCCATCTTCACC | ||
| Rib-R | CATACTGAGCTTTTAAATCAGGTGA | ||
| Epsilon-R | CCAGATACATTTTTTACTAAAGCGG | ||
| Alp2/3-R | CACTCGGATTACTATAATATTTAGCAC | ||
| Alp4-R | TTAATTTGCACCGGATTAACACCAC | ||
| Alp2-F | CAGACTGTTAAAGTGGATGAAGATATTACCTTTACGG |
| |
| Alp2-R | GGTATCTGGTTTATGACCATTTTTCCAGTTATACG | ||
| antimicrobial resistance associated genes | ermA-F | CCCGAAAAATACGCAAAATTTCAT |
|
| ermA-R | CCCTGTTTACCCATTTATAAACG | ||
| ermB-F | TGGTATTCCAAATGCGTAATG | ||
| ermB-R | CTGTGGTATGGCGGGTAAGT | ||
| mefA/E-F | CAATATGGGCAGGGCAAG | ||
| mefA/E-R | AAGCTGTTCCAATGCTACGG | ||
| tetM-F | GTGGACAAAGGTACAACGAG | ||
| tetM-R | CGGTAAAGTTCGTCACACAC | ||
| tetO-F | AACTTAGGCATTCTGGCTCAC | ||
| tetO-R | TCCCACTGTTCCATATCGTCA | ||
| tetK-F | GATCAATTGTAGCTTTAGGTGAAGG | ||
| tetK-R | TTTTGTTGATTTACCAGGTACCATT | ||
| tetL-F | TGGTGGAATGATAGCCCATT | ||
| tetL-R | CAGGAATGACAGCACGCTAA | ||
| lnuB-F | CCTACCTATTGTTTGTGGAA |
| |
| lnuB-R | ATAACGTTACTCTCCTATTC | ||
| gyrA-F | GGTTTAAAACCTGTTCATCGTCGT |
| |
| gyrA-R | GCAATACCAGTTGCACCATTGACT | ||
| parC-F | CCGGATATTCGTGATGGCTT | ||
| parC-R | TGACTAAAAGATTGGGAAAGGC | ||
| pilus islands | PI-1-F | CTACCAACGGCCAAGCTATTTACC |
|
| PI-1-R | TAGCCGCTTTTTCATTCTTTCTCC | ||
| PI-2a-F | AACTCCCTATATTTGCAGGTTCAA | ||
| PI-2a-R | CGGGTGTAACGACTTTTATCTGAT | ||
| PI-2b-F | GGGGGTAGGCTTAATGGCTTAT | ||
| PI-2b-R | TCCGGTTTAACTGTTCTGATTTGAT |
Ref, Reference.
Figure 1Dendrogram constructed from the multi-locus sequence typing (MLST) profiles of seven housekeeping genes of 21 GBS isolates.
Relationships between sequence type and serotype in 21 invasive GBS isolates.
| Clonal complex (CC) | Sequence type (ST) | Serotype | ||||
|---|---|---|---|---|---|---|
| Ia(n/%) | Ib(n/%) | III (n/%) | V (n/%) | Total | ||
| CC23 | ST23 | 2 (9.5) | – | – | – | 2 (9.5) |
| CC19 | ST19 | – | – | 2 (9.5) | – | 2 (9.5) |
| CC17 | ST17 | – | – | 2 (9.5) | – | 2 (9.5) |
| CC10 | ST10 | – | 14 (66.7) | – | – | 14 (66.7) |
| CC1 | ST1 | – | – | – | 1 (4.8) | 1 (4.8) |
| Total | 2 (9.5) | 14 (66.7) | 4 (19.0) | 1 (4.8) | 21 (100.0) | |
Number of Ib/ST10 strains vs all other isolates.
Demographics and clinical features of infants with type Ib/ST10 GBS invasive infections compared with those with other GBS invasive infections.
| Clinical characteristics | Type Ib/ST10 strains (n =14) | Other type strains (n = 7) | Total (n =21) |
|---|---|---|---|
| Preterm (gestational age <37 weeks) | 4 (28.6) | 0 (0) | 4 (19.0) |
| Low birth weight(<2,500 g) | 2 (14.3) | 0 (0) | 2 (9.5) |
| Gender | |||
| Male n (%) | 9 (64.3) | 4 (57.1) | 13 (61.9) |
| Female n (%) | 5 (35.7) | 3 (42.9) | 8 (38.9) |
| Onset of diseases | |||
| EOD | 0 (0) | 3 (42.9) | 3 (14.3) |
| LOD | 8 (57.1)a | 2 (28.6) | 10 (47.6) |
| LLOD | 6 (42.9)a | 2 (28.6) | 8 (38.1) |
| Bacterial infections | |||
| Sepsis | 8 (57.1) | 5 (71.4) | 13 (61.9) |
| Meningitis | 9 (64.3)a | 2 (28.6) | 11 (52.4) |
| Pneumonia | 8 (57.1) | 5 (71.4) | 13 (61.9) |
| Cellulitis | 0 (0) | 0 (0) | 0 (0) |
| Clinical complications | |||
| Septic shock | 2 (14.3) | 0 (0) | 2 (9.5) |
| Respiratory failure | 1 (7.1) | 0 (0) | 1 (4.8) |
| Heart failure | 2 (14.3) | 0 (0) | 2 (9.5) |
| Multi-organ failure | 0 (0) | 0 (0) | 0 (0) |
| Discharge outcome | |||
| Recovered | 12 (85.7) | 5 (71.4) | 17 (81.0) |
| Transferred to other | 1 (7.1) | 0 (0) | 1 (4.8) |
| Died | 0 (0) | 0 (0) | 0 (0) |
| Abnormal neurology at | 1 (7.1) | 0 (0) | 1 (4.8) |
| Discharge requested | 0 (0) | 2 (28.6) | 2 (9.5) |
All data were expressed as number (percentage %). aInfants with type Ib/ST10 GBS diseases vs all other isolates.
Figure 2Dendrogram constructed from the CRISPR1 profiles of GBS strains.
Figure 3Distribution of antibiotic resistance gene and phenotypes in the GBS isolates.
Information on the susceptibility to tetracycline of type Ib/ST10 GBS strains obtained through the literature search.
| Country (study period) | Sample source | No. of isolates(n/%) | Surface protein genes | Pilus island | Tetracycline susceptibility | Resistance Genes | Ref./isolate/ID |
|---|---|---|---|---|---|---|---|
| South Korea (1995–2015) | Invasive infant infections | 3/3.1 | none | S |
| ||
| China (2002–2012) | Invasive or colonizing infections | 2/2.3 | S |
| |||
| Portugal (2005–2015) | Invasive or colonizing infection | 1/0.5 | eps | PI-1,PI-2a | tetM |
| |
| China (2008–2015) | Invasive infant infection and colonizing adult infections | 3/3.0 | hylB,lmb,scpB,bac,Alpha-C | S |
| ||
| Italy (2010–2016) | Invasive and colonizing adult infections | 4/36.4 | Alpha-C | S |
| ||
| China (2015–2018) | Invasive or colonizing infections | 3/12.5 | Alpha-C | S |
|
Ref, Reference.