| Literature DB >> 34046518 |
Oladele S Olatunya1,2, Dulcinea M Albuquerque2, Adeniyi F Fagbamigbe3, Opeyemi A Faboya1, Ayotunde E Ajibola4, Oluwatoyin A Babalola3, Adewale O Adebisi4, Adeyinka G Falusi3, Adekunle Adekile5, Fernando F Costa2.
Abstract
This study aimed to determine the performance of a rapid, point-of-care testing device (HemotypeSC)™ for diagnosing sickle cell disease (SCD) relative to 2 commonly-used methods compared to DNA polymerase chain reaction (PCR) as the reference standard. The diagnostic performance of (HemotypeSC)™ in diagnosing SCD and determining various other Hb genotypes relative to high performance liquid chromatography (HPLC) and cellulose acetate Hb electrophoresis in alkaline buffer (CAE) was investigated among 156 participants aged 4 to 23 years in Ekiti, Southwest Nigeria. PCR was considered as the reference method/gold standard. The sensitivity and specificity for SS, SC, AS, AC, and AA genotypes by HemotypeSC and HPLC when compared with PCR, were each 100%. Similarly, their positive and negative predictive values were each 100%. However, sensitivity and specificity for identifying these Hb genotypes by CAE were 100, 100, 96.5, 0, 99.2%, and 99, 100, 92.9, 0, 91.7%. Also, CAE did not identify any of the 2 HbAC individuals that were correctly identified by PCR and both HemotypeSC, and HPLC, thus representing 100% HbAC misdiagnosis. In conclusion, this study shows that HemotypeSC has perfect concordance with PCR and 100% accuracy in diagnosing SCD in the population tested. Its ease of use, accuracy and other attributes make it suitable for use in sub-Saharan Africa for rapid determination of Hb genotypes.Entities:
Keywords: Nigeria; early diagnosis; point-of care testing; sickle cell disease; sub-Saharan Africa
Year: 2021 PMID: 34046518 PMCID: PMC8138286 DOI: 10.1177/2333794X211016789
Source DB: PubMed Journal: Glob Pediatr Health ISSN: 2333-794X
Distribution of Participants’ Hemoglobin Types and their HBF Values.
| Participants | SS (n = 99) | SC (n = S) | AS (n = l4) | AC (n = 2) | AA (n = 36) |
|---|---|---|---|---|---|
| HBF% (Mean ± SD) | 10.2 ± 6.1 | 1.7 ± 1.3 | 1.4 ± 1.1 | 0.7 ± 0.2 | 0.7 ± 0.3 |
| HBF% (Median, IOR) | 9.2 (4.9-14.8) | 0.9(0.7-2.9) | 0.6 (0.5-1.5) | 0.6 (0.5-0.8) | 0.6 (0.3-1.0) |
Abbreviations: IOR, inter quartile range; HbF, fetal hemoglobin; SS-HbSS, SC-HbSC, AS-HbAS, AC-HbAC, AA-HbAA.
The Sensitivity Analysis of Cellulose Acetate Electrophoresis, HemotypeSC and HPLC Methods versus PCR in the Diagnosis of Phenotypes and Hb Variants.
| Phenotype | Method | TN | FP | FN | TP | Sensitivity | 95% CI | Specificity | 95% CI | PPV | NPV |
|---|---|---|---|---|---|---|---|---|---|---|---|
| AA | Electrophoresis | 119 | 1 | 3 | 33 | 0.992 | 0.948-0.999 | 0.917 | 0.764-0.978 | 0.971 | 0.976 |
| HemotypeSC | 120 | 0 | 0 | 36 | 1.000 | 0.962-1.000 | 1.000 | 0.880-1.000 | 1.000 | 1.000 | |
| HPLC | 120 | 0 | 0 | 36 | 1.000 | 0.962-1.000 | 1.000 | 0.879-1.000 | 1.000 | 1.000 | |
| AC | HemotypeSC | 154 | 0 | 0 | 2 | 1.000 | 0.970-1.000 | 1.000 | 0.197-1.000 | 1.000 | 1.000 |
| HPLC | 154 | 0 | 0 | 2 | 1.000 | 0.970-1.000 | 1.000 | 0.197-1.000 | 1.000 | 1.000 | |
| AS | Electrophoresis | 137 | 5 | 1 | 13 | 0.965 | 0.916-0.996 | 0.929 | 0.642-0.996 | 0.722 | 0.993 |
| HemotypeSC | 142 | 0 | 0 | 14 | 1.000 | 0.967-1.000 | 1.000 | 0.732-1.000 | 1.000 | 1.000 | |
| HPLC | 142 | 0 | 0 | 14 | 1.000 | 0.967-1.000 | 1.000 | 0.732-1.000 | 1.000 | 1.000 | |
| SC | Electrophoresis | 151 | 0 | 0 | 5 | 1.000 | 0.969-1.000 | 1.000 | 0.463-1.000 | 1.000 | 1.000 |
| HemotypeSC | 151 | 0 | 0 | 5 | 1.000 | 0.969-1.000 | 1.000 | 0.463-1.000 | 1.000 | 1.000 | |
| HPLC | 151 | 0 | 0 | 5 | 1.000 | 0.969-1.000 | 1.000 | 0.463-1.000 | 1.000 | 1.000 | |
| SS | Electrophoresis | 57 | 0 | 0 | 99 | 1.000 | 0.921-1.000 | 1.000 | 0.953-1.000 | 1.000 | 1.000 |
| HemotypeSC | 57 | 0 | 0 | 99 | 1.000 | 0.921-1.000 | 1.000 | 0.953-1.000 | 1.000 | 1.000 | |
| HPLC | 57 | 0 | 0 | 99 | 1.000 | 0.921-1.000 | 1.000 | 0.953-1.000 | 1.000 | 1.000 | |
|
| |||||||||||
| A | Electrophoresis | 104 | 0 | 0 | 52 | 1.000 | 0.956-1.000 | 1.000 | 0.914-1.000 | 1.000 | 1.000 |
| HemotypeSC | 104 | 0 | 0 | 52 | 1.000 | 0.956-1.000 | 1.000 | 0.914-1.000 | 1.000 | 1.000 | |
| HPLC | 104 | 0 | 1 | 51 | 1.000 | 0.956-1.000 | 0.981 | 0.884-0.999 | 1.000 | 0.990 | |
| S | Electrophoresis | 33 | 5 | 1 | 117 | 0.868 | 0.711-0.951 | 0.992 | 0.947-0.999 | 0.959 | 0.971 |
| HemotypeSC | 38 | 0 | 0 | 118 | 1.000 | 0.885-1.000 | 1.000 | 0.961-1.000 | 1.000 | 1.000 | |
| HPLC | 38 | 0 | 0 | 118 | 1.000 | 0.885-1.000 | 1.000 | 0.961-1.000 | 1.000 | 1.000 | |
| C | Electrophoresis | 148 | 0 | 3 | 5 | 1.000 | 0.968-1.000 | 0.625 | 0.259-0.897 | 1.000 | 0.980 |
| HemotypeSC | 148 | 0 | 0 | 8 | 1.000 | 0.968-1.000 | 1.000 | 0.598-1.000 | 1.000 | 1.000 | |
| HPLC | 148 | 0 | 1 | 7 | 1.000 | 0.968-1.000 | 0.875 | 0.467-0.993 | 1.000 | 0.993 | |
Abbreviations: HPLC, high performance liquid chromatography; TP, true positive; TN, true negative; FP, false positive; FN, false negative; PPV, positive predictive value; NPV, negative predictive value; CI, confidence interval.
Comparison of Area under Curves of the ROCs for the Performance of the 3 Methods Compared with the Gold Standard in the Diagnosis of SCD Phenotypes and Hb Variants.
| Phenotypes | Method | Obs | AUC of ROC | Std. Err | [95% CI] | [95% CI] | X2 | |
|---|---|---|---|---|---|---|---|---|
| AA | Electrophoresis | 156 | 0.954 | 0.024 | 0.908 | 1.000 | 3.73 | .0535 |
| HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| HPLC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| Electrophoresis | 156 | 0.500 | 0.000 | 0.500 | 0.500 | |||
| AC | HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | 0.00 | 1.0000 |
| HPLC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| AS | Electrophoresis | 156 | 0.947 | 0.037 | 0.875 | 1.000 | 2.13 | .144 |
| HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| HPLC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| SC | Electrophoresis | 156 | 1.000 | 0.000 | 1.000 | 1.000 | 0.00 | 1.000 |
| HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| HPLC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| SS | Electrophoresis | 156 | 1.000 | 0.000 | 1.000 | 1.000 | 0.00 | 1.000 |
| HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| HPLC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
|
| ||||||||
| A | Electrophoresis | 156 | 1.000 | 0.000 | 1.000 | 1.000 | 1.00 | .3173 |
| HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| HPLC | 156 | 0.990 | 0.010 | 0.971 | 1.000 | |||
| S | Electrophoresis | 156 | 0.930 | 0.028 | 0.875 | 0.985 | 6.21 | .0127 |
| HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| HPLC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| C | Electrophoresis | 156 | 0.813 | 0.092 | 0.633 | 0.992 | 4.20 | .1225 |
| HemotypeSC | 156 | 1.000 | 0.000 | 1.000 | 1.000 | |||
| HPLC | 156 | 0.938 | 0.063 | 0.815 | 1.000 | |||
Abbreviations: HPLC, high performance liquid chromatography; AUC, area under curves; ROC, receptor operatives characteristic curves; CI, confidence interval.
Figure 1.ROC of HemotypeSC, electrophoresis (CAE), & HPLC versus gold standard.