| Literature DB >> 34046384 |
Yuexing Tu1, Xianlong Zhou2, Lina Shao1, Jiayin Zheng3, Jiafeng Wang1, Yixin Wang3, Weiwei Tong4, Mingshan Wang1, Jia Wu1, Junpeng Zhu1, Rong Yan1, Yemin Ji1, Legao Chen1, Di Zhu1, Huafang Wang1, Sheng Chen1, Renyang Liu1, Jingyang Lin1, Jun Zhang1, Haijun Huang1, Yan Zhao2, Minghua Ge1.
Abstract
Background: The COVID-19 global pandemic has posed unprecedented challenges to health care systems all over the world. The speed of the viral spread results in a tsunami of patients, which begs for a reliable screening tool using readily available data to predict disease progression.Entities:
Keywords: COVID-19; nomogram; pandemic; risk factor; triage
Year: 2021 PMID: 34046384 PMCID: PMC8144294 DOI: 10.3389/fpubh.2021.610280
Source DB: PubMed Journal: Front Public Health ISSN: 2296-2565
Characteristics of patients in the training and validation cohorts.
| 0.003 | 0.002 | |||||||
| Female | 311 (56.0%) | 69 (42.9%) | 380 (53.1%) | 67 (60.4%) | 35 (38.9%) | 102 (50.7%) | ||
| Male | 244 (44.0%) | 92 (57.1%) | 336 (46.9%) | 44 (39.6%) | 55 (61.1%) | 99 (49.3%) | ||
| <0.001 | <0.001 | |||||||
| N | 555 | 161 | 716 | 111 | 90 | 201 | ||
| Median (IQR) | 52 (38–62) | 62 (54–72) | 55 (41–65) | 61 (50–68) | 67 (58–73) | 63 (53–70) | ||
| 0.072 | NA | |||||||
| No | 325 (89.5%) | 94 (95.9%) | 419 (90.9%) | NA | NA | NA | ||
| Yes | 38 (10.5%) | 4 (4.1%) | 42 (9.1%) | NA | NA | NA | ||
| 0.933 | 0.001 | |||||||
| N | 547 | 158 | 705 | 111 | 90 | 201 | ||
| Median (IQR) | 7 (3–15) | 7 (3–15) | 7 (3–15) | 8 (4–13) | 12 (7–16) | 10 (5–15) | ||
| 0.006 | 0.275 | |||||||
| No | 195 (35.1%) | 38 (23.6%) | 233 (32.5%) | 24 (21.6%) | 14 (15.6%) | 38 (18.9%) | ||
| Yes | 360 (64.9%) | 123 (76.4%) | 483 (67.5%) | 87 (78.4%) | 76 (84.4%) | 163 (81.1%) | ||
| 0.489 | NA | |||||||
| N | 402 | 120 | 522 | NA | NA | NA | ||
| Median (IQR) | 65 (57.5–73.0) | 65 (60.0–74.0) | 65 (58.0–73.0) | NA | NA | NA | ||
| 0.64 | NA | |||||||
| N | 343 | 120 | 463 | NA | NA | NA | ||
| Median (IQR) | 165 (160–170) | 165 (160–170) | 165 (160–170) | NA | NA | NA | ||
| 0.118 | NA | |||||||
| N | 342 | 118 | 460 | NA | NA | NA | ||
| Median (IQR) | 23.5 (21.5–25.6) | 24.1 (22.4–26.0) | 23.7 (21.7–25.7) | NA | NA | NA | ||
| <0.001 | 0.177 | |||||||
| No | 519 (93.9%) | 132 (83.0%) | 651 (91.4%) | 108 (97.3%) | 84 (93.3%) | 192 (95.5%) | ||
| Yes | 34 (6.1%) | 27 (17.0%) | 61 (8.6%) | 3 (2.7%) | 6 (6.7%) | 9 (4.5%) | ||
| 0.002 | NA | |||||||
| No | 538 (97.3%) | 146 (91.8%) | 684 (96.1%) | NA | NA | NA | ||
| Yes | 15 (2.7%) | 13 (8.2%) | 28 (3.9%) | NA | NA | NA | ||
| 0.018 | 0.054 | |||||||
| No | 493 (88.8%) | 130 (81.8%) | 623 (87.3%) | 110 (99.1%) | 85 (94.4%) | 195 (97.0%) | ||
| Yes | 62 (11.2%) | 29 (18.2%) | 91 (12.7%) | 1 (0.9%) | 5 (5.6%) | 6 (3.0%) | ||
| <0.001 | 0.017 | |||||||
| No | 451 (81.4%) | 91 (56.9%) | 542 (75.9%) | 79 (71.8%) | 50 (55.6%) | 129 (64.5%) | ||
| Yes | 103 (18.6%) | 69 (43.1%) | 172 (24.1%) | 31 (28.2%) | 40 (44.4%) | 71 (35.5%) | ||
| 0.016 | 0.156 | |||||||
| No | 509 (91.9%) | 136 (85.5%) | 645 (90.5%) | 100 (90.1%) | 75 (83.3%) | 175 (87.1%) | ||
| Yes | 45 (8.1%) | 23 (14.5%) | 68 (9.5%) | 11 (9.9%) | 15 (16.7%) | 26 (12.9%) | ||
| 0.233 | 0.114 | |||||||
| No | 542 (98.0%) | 152 (96.2%) | 694 (97.6%) | 111 (100.0%) | 88 (97.8%) | 199 (99.0%) | ||
| Yes | 11 (2.0%) | 6 (3.8%) | 17 (2.4%) | 0 (0.0%) | 2 (2.2%) | 2 (1.0%) | ||
| <0.001 | 0.228 | |||||||
| No | 535 (96.6%) | 125 (78.6%) | 660 (92.6%) | 102 (91.9%) | 78 (86.7%) | 180 (89.6%) | ||
| Yes | 19 (3.4%) | 34 (21.4%) | 53 (7.4%) | 9 (8.1%) | 12 (13.3%) | 21 (10.4%) | ||
| <0.001 | 0.001 | |||||||
| No | 434 (78.2%) | 90 (55.9%) | 524 (73.2%) | 57 (51.4%) | 25 (27.8%) | 82 (40.8%) | ||
| Yes | 121 (21.8%) | 71 (44.1%) | 192 (26.8%) | 54 (48.6%) | 65 (72.2%) | 119 (59.2%) | ||
| 0.082 | 0.503 | |||||||
| No | 519 (93.5%) | 144 (89.4%) | 663 (92.6%) | 106 (95.5%) | 84 (93.3%) | 190 (94.5%) | ||
| Yes | 36 (6.5%) | 17 (10.6%) | 53 (7.4%) | 5 (4.5%) | 6 (6.7%) | 11 (5.5%) | ||
| 0.011 | 0.918 | |||||||
| No | 499 (89.9%) | 133 (82.6%) | 632 (88.3%) | 104 (93.7%) | 84 (93.3%) | 188 (93.5%) | ||
| Yes | 56 (10.1%) | 28 (17.4%) | 84 (11.7%) | 7 (6.3%) | 6 (6.7%) | 13 (6.5%) | ||
| <0.001 | 0.738 | |||||||
| No | 288 (51.9%) | 56 (34.8%) | 344 (48.0%) | 37 (33.3%) | 28 (31.1%) | 65 (32.3%) | ||
| Yes | 267 (48.1%) | 105 (65.2%) | 372 (52.0%) | 74 (66.7%) | 62 (68.9%) | 136 (67.7%) | ||
BMI, Body Mass Index; DM, Diabetes Mellitus; COPD, Chronic Obstructive Pulmonary Disease.
Risk factors associated with developing severe/critical group COVID-19.
| Sex (ref: male) | 0.588 (0.413–0.839) | 0.003 | 0.696 (0.459–1.057) | 0.089 |
| Age (per year) | 1.049 (1.036–1.063) | 0.000 | 1.035 (1.019–1.051) | 0.000 |
| Medical professionals | 0.364 (0.127–1.046) | 0.061 | ||
| Fever | 1.753 (1.171–2.624) | 0.006 | 1.940 (1.204–3.126) | 0.006 |
| BMI (kg/m2) | 1.058 (0.991–1.130) | 0.093 | ||
| Current smoker | 3.122 (1.819–5.359) | 0.000 | 1.894 (1.008–3.559) | 0.047 |
| Former smoker | 3.194 (1.486–6.862) | 0.003 | ||
| Alcohol consumption | 1.774 (1.096–2.871) | 0.020 | ||
| Hypertension | 3.320 (2.273–4.850) | 0.000 | 1.845 (1.157–2.942) | 0.010 |
| DM | 1.913 (1.118–3.272) | 0.018 | ||
| Cardio-cerebrovascular Disease | 7.659 (4.228–13.875) | 0.000 | 4.109 (2.086–8.093) | 0.000 |
| Dyspnea | 2.830 (1.953–4.099) | 0.000 | 2.244 (1.464–3.440) | 0.000 |
| Cough | 2.022 (1.405–2.912) | 0.000 | 1.723 (1.137–2.611) | 0.010 |
| Diarrhea | 1.702 (0.929–3.119) | 0.085 | ||
| Myalgia | 1.876 (1.147–3.069) | 0.012 | 1.981 (1.120–3.504) | 0.019 |
Variables were transformed to their nature logarithms.
CI, Confidence Interval; OR, Odds Ratio; DM, Diabetes Mellitus.
Figure 1Nomogram of probability to develop severe/critical COVID-19. To use the nomogram, draw an upward vertical line from each covariate to the points bar to calculate the number of points. Based on the sum of the covariate points, draw a downward vertical line from the total points line to calculate the probability of developing severe/critical COVID-19.
Figure 2(A) ROC curve for the nomogram based on the full Zhongnan Hospital dataset. The bias-corrected AUC is 0.772 based on internal validation using bootstrap resampling (1,000 patients) (B) ROC curve from an external, independent validation using the Jinyintan Hospital dataset. The estimate of AUC and its 95% confidence interval are shown in the plots. Key: ROC, receiver operating characteristic. AUC, area under the curve.
Figure 3Calibration plot for the nomogram. The bias-corrected (overfitting-corrected) estimates of predicted vs. observed values were obtained based on bootstrap resampling with 1,000 samples for internal validation purpose.
Figure 4(A) External calibration plot for Jinyintan dataset based on the original nomogram. (B) External calibration plot for Jinyintan dataset based on the recalibrated nomogram. The nomogram was recalibrated by the intercept and slope framework as originally proposed by D.R. Cox.8 The plots are grouped into five bins based on their predicted probabilities, and then the bin prevalence (the ratio of plots in this bin with observed number of severe/critical COVID-19 vs. the total number of plots in this bin) is calculated for each bin. The confidence interval for each bin is also plotted, and the total number of plots is labeled above each the bin. Confidence intervals are calculated for the binomial bin counts using the F distribution.