Literature DB >> 34046246

Semi-Supervised Classification of Noisy, Gigapixel Histology Images.

J Vince Pulido1, Shan Guleria2, Lubaina Ehsan3, Matthew Fasullo4, Robert Lippman5, Pritesh Mutha5, Tilak Shah5, Sana Syed3, Donald E Brown6.   

Abstract

One of the greatest obstacles in the adoption of deep neural networks for new medical applications is that training these models typically require a large amount of manually labeled training samples. In this body of work, we investigate the semi-supervised scenario where one has access to large amounts of unlabeled data and only a few labeled samples. We study the performance of MixMatch and FixMatch-two popular semi-supervised learning methods-on a histology dataset. More specifically, we study these models' impact under a highly noisy and imbalanced setting. The findings here motivate the development of semi-supervised methods to ameliorate problems commonly encountered in medical data applications.

Entities:  

Keywords:  Histology; Machine Learning; Semi-supervised Learning

Year:  2020        PMID: 34046246      PMCID: PMC8144886          DOI: 10.1109/BIBE50027.2020.00097

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Bioinformatics Bioeng        ISSN: 2159-5410


  6 in total

1.  BACH: Grand challenge on breast cancer histology images.

Authors:  Guilherme Aresta; Teresa Araújo; Scotty Kwok; Sai Saketh Chennamsetty; Mohammed Safwan; Varghese Alex; Bahram Marami; Marcel Prastawa; Monica Chan; Michael Donovan; Gerardo Fernandez; Jack Zeineh; Matthias Kohl; Christoph Walz; Florian Ludwig; Stefan Braunewell; Maximilian Baust; Quoc Dang Vu; Minh Nguyen Nhat To; Eal Kim; Jin Tae Kwak; Sameh Galal; Veronica Sanchez-Freire; Nadia Brancati; Maria Frucci; Daniel Riccio; Yaqi Wang; Lingling Sun; Kaiqiang Ma; Jiannan Fang; Ismael Kone; Lahsen Boulmane; Aurélio Campilho; Catarina Eloy; António Polónia; Paulo Aguiar
Journal:  Med Image Anal       Date:  2019-05-31       Impact factor: 8.545

2.  Virtual Adversarial Training: A Regularization Method for Supervised and Semi-Supervised Learning.

Authors:  Takeru Miyato; Shin-Ichi Maeda; Masanori Koyama; Shin Ishii
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2018-07-23       Impact factor: 6.226

3.  Recent Advances in Open Set Recognition: A Survey.

Authors:  Chuanxing Geng; Sheng-Jun Huang; Songcan Chen
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2020-03-18       Impact factor: 6.226

4.  Patch-based Convolutional Neural Network for Whole Slide Tissue Image Classification.

Authors:  Le Hou; Dimitris Samaras; Tahsin M Kurc; Yi Gao; James E Davis; Joel H Saltz
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2016 Jun-Jul

5.  A Novel Ensemble Method for Imbalanced Data Learning: Bagging of Extrapolation-SMOTE SVM.

Authors:  Qi Wang; ZhiHao Luo; JinCai Huang; YangHe Feng; Zhong Liu
Journal:  Comput Intell Neurosci       Date:  2017-01-30

6.  A Cluster-then-label Semi-supervised Learning Approach for Pathology Image Classification.

Authors:  Mohammad Peikari; Sherine Salama; Sharon Nofech-Mozes; Anne L Martel
Journal:  Sci Rep       Date:  2018-05-08       Impact factor: 4.379

  6 in total
  2 in total

1.  A Semi-supervised Learning for Segmentation of Gigapixel Histopathology Images from Brain Tissues.

Authors:  Zhengfeng Lai; Chao Wang; Zin Hu; Brittany N Dugger; Sen-Ching Cheung; Chen-Nee Chuah
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2021-11

2.  Joint Semi-supervised and Active Learning for Segmentation of Gigapixel Pathology Images with Cost-Effective Labeling.

Authors:  Zhengfeng Lai; Chao Wang; Luca Cerny Oliveira; Brittany N Dugger; Sen-Ching Cheung; Chen-Nee Chuah
Journal:  IEEE Int Conf Comput Vis Workshops       Date:  2021-11-24
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.