Literature DB >> 34045470

Kvasir-Capsule, a video capsule endoscopy dataset.

Pia H Smedsrud1,2,3, Vajira Thambawita4,5, Steven A Hicks4,5, Debesh Jha4,6, Thomas de Lange7,8,9,10, Michael A Riegler4, Pål Halvorsen4,5, Henrik Gjestang4,11, Oda Olsen Nedrejord4,11, Espen Næss4,11, Hanna Borgli4,11, Tor Jan Derek Berstad8, Sigrun L Eskeland7, Mathias Lux12, Håvard Espeland8, Andreas Petlund8, Duc Tien Dang Nguyen13, Enrique Garcia-Ceja14, Dag Johansen6, Peter T Schmidt15,16, Ervin Toth17, Hugo L Hammer4,5.   

Abstract

Artificial intelligence (AI) is predicted to have profound effects on the future of video capsule endoscopy (VCE) technology. The potential lies in improving anomaly detection while reducing manual labour. Existing work demonstrates the promising benefits of AI-based computer-assisted diagnosis systems for VCE. They also show great potential for improvements to achieve even better results. Also, medical data is often sparse and unavailable to the research community, and qualified medical personnel rarely have time for the tedious labelling work. We present Kvasir-Capsule, a large VCE dataset collected from examinations at a Norwegian Hospital. Kvasir-Capsule consists of 117 videos which can be used to extract a total of 4,741,504 image frames. We have labelled and medically verified 47,238 frames with a bounding box around findings from 14 different classes. In addition to these labelled images, there are 4,694,266 unlabelled frames included in the dataset. The Kvasir-Capsule dataset can play a valuable role in developing better algorithms in order to reach true potential of VCE technology.

Entities:  

Year:  2021        PMID: 34045470     DOI: 10.1038/s41597-021-00920-z

Source DB:  PubMed          Journal:  Sci Data        ISSN: 2052-4463            Impact factor:   6.444


  6 in total

1.  RAt-CapsNet: A Deep Learning Network Utilizing Attention and Regional Information for Abnormality Detection in Wireless Capsule Endoscopy.

Authors:  Md Jahin Alam; Rifat Bin Rashid; Shaikh Anowarul Fattah; Mohammad Saquib
Journal:  IEEE J Transl Eng Health Med       Date:  2022-08-16

2.  Colonoscopy polyp detection and classification: Dataset creation and comparative evaluations.

Authors:  Kaidong Li; Mohammad I Fathan; Krushi Patel; Tianxiao Zhang; Cuncong Zhong; Ajay Bansal; Amit Rastogi; Jean S Wang; Guanghui Wang
Journal:  PLoS One       Date:  2021-08-17       Impact factor: 3.240

Review 3.  Surgical data science - from concepts toward clinical translation.

Authors:  Lena Maier-Hein; Matthias Eisenmann; Duygu Sarikaya; Keno März; Toby Collins; Anand Malpani; Johannes Fallert; Hubertus Feussner; Stamatia Giannarou; Pietro Mascagni; Hirenkumar Nakawala; Adrian Park; Carla Pugh; Danail Stoyanov; Swaroop S Vedula; Kevin Cleary; Gabor Fichtinger; Germain Forestier; Bernard Gibaud; Teodor Grantcharov; Makoto Hashizume; Doreen Heckmann-Nötzel; Hannes G Kenngott; Ron Kikinis; Lars Mündermann; Nassir Navab; Sinan Onogur; Tobias Roß; Raphael Sznitman; Russell H Taylor; Minu D Tizabi; Martin Wagner; Gregory D Hager; Thomas Neumuth; Nicolas Padoy; Justin Collins; Ines Gockel; Jan Goedeke; Daniel A Hashimoto; Luc Joyeux; Kyle Lam; Daniel R Leff; Amin Madani; Hani J Marcus; Ozanan Meireles; Alexander Seitel; Dogu Teber; Frank Ückert; Beat P Müller-Stich; Pierre Jannin; Stefanie Speidel
Journal:  Med Image Anal       Date:  2021-11-18       Impact factor: 13.828

4.  A Computer-Aided Method for Digestive System Abnormality Detection in WCE Images.

Authors:  Zahra Amiri; Hamid Hassanpour; Azeddine Beghdadi
Journal:  J Healthc Eng       Date:  2021-10-18       Impact factor: 2.682

5.  From labels to priors in capsule endoscopy: a prior guided approach for improving generalization with few labels.

Authors:  Anuja Vats; Ahmed Mohammed; Marius Pedersen
Journal:  Sci Rep       Date:  2022-09-20       Impact factor: 4.996

6.  Rhode Island gastroenterology video capsule endoscopy data set.

Authors:  Amber Charoen; Averill Guo; Panisara Fangsaard; Supakorn Taweechainaruemitr; Nuwee Wiwatwattana; Theekapun Charoenpong; Harlan G Rich
Journal:  Sci Data       Date:  2022-10-06       Impact factor: 8.501

  6 in total

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