Literature DB >> 34045305

Unlocking G-Quadruplexes as Antiviral Targets.

Ardavan Abiri1, Marc Lavigne1, Masoud Rezaei1, Sanaz Nikzad1, Peyman Zare1, Jean-Louis Mergny2, Hamid-Reza Rahimi3.   

Abstract

Guanine-rich DNA and RNA sequences can fold into noncanonical nucleic acid structures called G-quadruplexes (G4s). Since the discovery that these structures may act as scaffolds for the binding of specific ligands, G4s aroused the attention of a growing number of scientists. The versatile roles of G4 structures in viral replication, transcription, and translation suggest direct applications in therapy or diagnostics. G4-interacting molecules (proteins or small molecules) may also affect the balance between latent and lytic phases, and increasing evidence reveals that G4s are implicated in generally suppressing viral processes, such as replication, transcription, translation, or reverse transcription. In this review, we focus on the discovery of G4s in viruses and the role of G4 ligands in the antiviral drug discovery process. After assessing the role of viral G4s, we argue that host G4s participate in immune modulation, viral tumorigenesis, cellular pathways involved in virus maturation, and DNA integration of viral genomes, which can be potentially employed for antiviral therapeutics. Furthermore, we scrutinize the impediments and shortcomings in the process of studying G4 ligands and drug discovery. Finally, some unanswered questions regarding viral G4s are highlighted for prospective future projects. SIGNIFICANCE STATEMENT: G-quadruplexes (G4s) are noncanonical nucleic acid structures that have gained increasing recognition during the last few decades. First identified as relevant targets in oncology, their importance in virology is now increasingly clear. A number of G-quadruplex ligands are known: viral transcription and replication are the main targets of these ligands. Both viral and cellular G4s may be targeted; this review embraces the different aspects of G-quadruplexes in both host and viral contexts.
Copyright © 2021 by The Author(s).

Entities:  

Year:  2021        PMID: 34045305     DOI: 10.1124/pharmrev.120.000230

Source DB:  PubMed          Journal:  Pharmacol Rev        ISSN: 0031-6997            Impact factor:   25.468


  11 in total

1.  Thermally Induced Transitions of d(G4T4G3) Quadruplexes Can Be Described as Kinetically Driven Processes.

Authors:  Iztok Prislan; Tomaz Urbic; Natasa Poklar Ulrih
Journal:  Life (Basel)       Date:  2022-06-01

2.  Never Cared for What They Do: High Structural Stability of Guanine-Quadruplexes in the Presence of Strand-Break Damage.

Authors:  Tom Miclot; Cécilia Hognon; Emmanuelle Bignon; Alessio Terenzi; Stéphanie Grandemange; Giampaolo Barone; Antonio Monari
Journal:  Molecules       Date:  2022-05-19       Impact factor: 4.927

Review 3.  G-Quadruplexes in Neurobiology and Virology: Functional Roles and Potential Therapeutic Approaches.

Authors:  Jinglei Xu; Haiyan Huang; Xiang Zhou
Journal:  JACS Au       Date:  2021-11-22

4.  G-Quadruplexes Formation at the Upstream Region of Replication Origin (OriL) of the Pseudorabies Virus: Implications for Antiviral Targets.

Authors:  Yance Zhu; Wenhao Liu; Chao Zhang
Journal:  Viruses       Date:  2021-11-04       Impact factor: 5.048

5.  Combining Electrospray Mass Spectrometry (ESI-MS) and Computational Techniques in the Assessment of G-Quadruplex Ligands: A Hybrid Approach to Optimize Hit Discovery.

Authors:  Giovanni Ribaudo; Alberto Ongaro; Erika Oselladore; Maurizio Memo; Alessandra Gianoncelli
Journal:  J Med Chem       Date:  2021-09-12       Impact factor: 7.446

6.  Identification of G-quadruplex DNA sequences in SARS-CoV2.

Authors:  Amit K Maiti
Journal:  Immunogenetics       Date:  2022-03-18       Impact factor: 3.330

7.  Guanine quadruplexes in the RNA genome of the tick-borne encephalitis virus: their role as a new antiviral target and in virus biology.

Authors:  Jiří Holoubek; Klára Bednářová; Jan Haviernik; Ivana Huvarová; Zuzana Dvořáková; Jiří Černý; Martina Outlá; Jiří Salát; Eva Konkol'ová; Evzen Boura; Daniel Růžek; Michaela Vorlíčková; Luděk Eyer; Daniel Renčiuk
Journal:  Nucleic Acids Res       Date:  2022-05-06       Impact factor: 19.160

8.  Fused in Liposarcoma Protein, a New Player in the Regulation of HIV-1 Transcription, Binds to Known and Newly Identified LTR G-Quadruplexes.

Authors:  Emanuela Ruggiero; Ilaria Frasson; Elena Tosoni; Matteo Scalabrin; Rosalba Perrone; Maja Marušič; Janez Plavec; Sara N Richter
Journal:  ACS Infect Dis       Date:  2022-05-02       Impact factor: 5.578

9.  SARS-CoV-2 Nsp3 unique domain SUD interacts with guanine quadruplexes and G4-ligands inhibit this interaction.

Authors:  Marc Lavigne; Olivier Helynck; Pascal Rigolet; Rofia Boudria-Souilah; Mireille Nowakowski; Bruno Baron; Sébastien Brülé; Sylviane Hoos; Bertrand Raynal; Lionel Guittat; Claire Beauvineau; Stéphane Petres; Anton Granzhan; Jean Guillon; Geneviève Pratviel; Marie-Paule Teulade-Fichou; Patrick England; Jean-Louis Mergny; Hélène Munier-Lehmann
Journal:  Nucleic Acids Res       Date:  2021-07-21       Impact factor: 16.971

10.  Structured Waters Mediate Small Molecule Binding to G-Quadruplex Nucleic Acids.

Authors:  Stephen Neidle
Journal:  Pharmaceuticals (Basel)       Date:  2021-12-22
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