Literature DB >> 34038837

A reversible valve-assisted chip coupling with integrated sample treatment and CRISPR/Cas12a for visual detection of Vibrio parahaemolyticus.

Hui Wu1, Yanju Chen1, Qunqing Yang2, Cheng Peng3, Xiaofu Wang3, Mengyao Zhang1, Siwenjie Qian1, Junfeng Xu4, Jian Wu5.   

Abstract

Vibrio parahaemolyticus (V. parahaemolyticus) is regarded as a major cause of seafood-associated illnesses, which has aroused widespread public concern. Here, a rapid and convenient detection method for V. parahaemolyticus detection was established by a reversible valve-assisted chip coupling with CRISPR/Cas12a. With optimized lysis buffer, loop mediated isothermal amplification (LAMP) reagents and CRISPR reagents, the whole detection process from sampling to results could be finished within 50 min. The structure of chip was simple and the cost was low. By relying on three reversible rotary valves and the rotation direction-dependent Coriolis pseudo force, the flow order of liquid and the direction of liquid flow could be precisely controlled. The LAMP amplicons were specifically and sensitively identified by CRISPR/Cas12a. Positive amplification would produce green fluorescent signal while negative amplification generated no fluorescent signal, which could be clearly distinguished by the naked eye. With 600 μL of samples processed, the limit of detection (LOD) for both pure cultured V. parahaemolyticus or spiked shrimp samples could achieve 30 copies/reaction. These illustrated the established method displayed great feasibility for real samples detection. In the future, the chip could also combine with other amplification reactions, like PCR or recombinase polymerase amplification reaction (RPA), to conduct detection by changing the corresponding lyophilized amplification reagents. Overall, the proposed detection platform displays great potential for food safety analysis and clinical diagnostics, especially in resource-limited areas.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  CRISPR/Cas12a; Chip; Loop-mediated isothermal amplification; Reversible valve; Vibrio parahaemolyticus

Year:  2021        PMID: 34038837     DOI: 10.1016/j.bios.2021.113352

Source DB:  PubMed          Journal:  Biosens Bioelectron        ISSN: 0956-5663            Impact factor:   10.618


  7 in total

1.  CE-RAA-CRISPR Assay: A Rapid and Sensitive Method for Detecting Vibrio parahaemolyticus in Seafood.

Authors:  Xinrui Lv; Weiwei Cao; Huang Zhang; Yilin Zhang; Lei Shi; Lei Ye
Journal:  Foods       Date:  2022-06-08

Review 2.  Powerful CRISPR-Based Biosensing Techniques and Their Integration With Microfluidic Platforms.

Authors:  Bing Chen; Ya Li; Feng Xu; Xiaonan Yang
Journal:  Front Bioeng Biotechnol       Date:  2022-02-23

Review 3.  Improved Strategies for CRISPR-Cas12-based Nucleic Acids Detection.

Authors:  Miao Qiu; Xiao-Ming Zhou; Lei Liu
Journal:  J Anal Test       Date:  2022-02-28

Review 4.  CRISPR-Cas Systems-Based Bacterial Detection: A Scoping Review.

Authors:  Kasturi Selvam; Mohamad Ahmad Najib; Muhammad Fazli Khalid; Mehmet Ozsoz; Ismail Aziah
Journal:  Diagnostics (Basel)       Date:  2022-05-27

5.  One-Pot Isothermal LAMP-CRISPR-Based Assay for Klebsiella pneumoniae Detection.

Authors:  Xiaotong Qiu; Xueping Liu; Xiao Ma; Ruixue Wang; Shenglin Chen; Fang Li; Zhenjun Li
Journal:  Microbiol Spectr       Date:  2022-07-20

6.  A Salmonella Microfluidic Chip Combining Non-Contact Eddy Heater and 3D Fan-Shaped Mixer with Recombinase Aided Amplification.

Authors:  Shangyi Wu; Hong Duan; Yingchao Zhang; Siyuan Wang; Lingyan Zheng; Gaozhe Cai; Jianhan Lin; Xiqing Yue
Journal:  Biosensors (Basel)       Date:  2022-09-05

7.  Immunocapture Magnetic Beads Enhanced the LAMP-CRISPR/Cas12a Method for the Sensitive, Specific, and Visual Detection of Campylobacter jejuni.

Authors:  Chao Li; Xuan Chen; Renqiao Wen; Peng Ma; Kui Gu; Cui Li; Changyu Zhou; Changwei Lei; Yizhi Tang; Hongning Wang
Journal:  Biosensors (Basel)       Date:  2022-03-02
  7 in total

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