| Literature DB >> 34036131 |
Phuong-Thao Ho1,2, Hoa Quynh Nguyen3, Elizabeth M A Kern4, Yong-Jin Won4,5.
Abstract
This article describes the experimental locomotor data used to study the general and adaptive responses to salt stress of the northern Pacific intertidal gastropod Batillaria attramentaria. The data were obtained from a series of 30-day experiments on snails acclimated to different salinity regimes. Snails were collected from coastal areas on the eastern and western sides of the North Pacific Ocean. The data consist of three parts: 1) raw videos recording the locomotion of the snails when exposed to novel artificial salinity regimes in laboratory settings, 2) Spectral Time-Lapse results of movement distance of the snails extracted from the recorded videos, and 3) CO1-gene sequences isolated from individuals collected from four sampling sites. A Linear Mixed-effect Model inference procedure was applied in an attempt to assess the impacts of geographic distribution and genetic composition on the locomotor response to salt stress in the snail B. attramentaria. The locomotor dataset we present are the first reports of locomotor response to salt stress of the snail B. attramentaria, that is valuable for further exploration and understanding of the impacts of environmental changes on the physiology and adaptive capacity of living marine molluscs.Entities:
Keywords: adaptive divergence; invasive species; locomotion; salinity; snail behavior
Year: 2021 PMID: 34036131 PMCID: PMC8138717 DOI: 10.1016/j.dib.2021.107113
Source DB: PubMed Journal: Data Brief ISSN: 2352-3409
Sampling information of the Batillaria attramentaria examined in the present study.
| Origin | Population | Location | Coordinates | Date of collection | Sea surface conditions | |
|---|---|---|---|---|---|---|
| Native | Hacheon-ri | Cheollabuk-do, South Korea | 35 °32′N, 126 °33′E | Tsushima | June, 2016 | 32±1 PSU, 24.5±0.5°C |
| Native | Nemuro city | Hokkaido Prefecture, Japan | 43°15′N, 145 °28′E | Tsushima | June, 2017 | 31±2 PSU, 21.5±1.5 °C |
| Native | Matsushima Bay | Miyagi Prefecture, Japan | 38 °22′N, 141°4′E | Kuroshio | May, 2018 | 31±2 PSU, 24±1 °C |
| Introduced | Monterey Bay | Elkhorn Slough, California, The USA | 36 °49′N, 121 °45′W | Kuroshio | February, 2017 | 4 PSU, 6±1 °C |
Fig. 1(A) An example screenshot of a locomotor video and Spectral Time-Lapse results of locomotor behavior tracking analyses of Batillaria attramentaria. (B) A text file (in .txt format) including locomotor video information, detecting path length and moving time. (C) A photo (in .tiff format) of moving trail of a snail. The red dot in figure C represents the initial position of the examined snail and the thick black circle is a moving trail of the snail recorded after the filming process. (D) Colored shapes of individual snails in figure D represent locations of an identical snail examined at different times. These different colors were according to the color map in the inset at the bottom of the figure. For the sake of simplicity and focusing on the individual snails, the colors of yellow, purple, navy, turquoise, and so on in the inset were cut off from it. The raw figure can be found in Mendeley repository database. (For interpretation of the references to color in this figure legend, the reader is referred to the web version of this article.)
Fig. 3Generic Salinity Expose-response function of the movement distance of Batillaria attramentaria under the effect of time. Gradient, turquoise-colored boxes represent the movement distance of snails exposed to different salinities. The solid black curves connect all means of movement distance of the snails exposed to different salinities. The bottom and top of the boxes are the 25th and 75th percentiles, the dashed vertical lines show the 50th percentiles, and the ends of the whiskers represent the minimum and maximum estimates of the movement distance. Outliers are represented by black circles beyond the whiskers.
(A) Summary of the analysis of variance to assess the effects of the explanatory variable of time on the movement distance of the snail Batillaria attramentaria. (B) Mean movement distance of B. attramentaria recorded every 2 days during the 30-day experiment.
| (A) | |||||
|---|---|---|---|---|---|
| N.d.f | D.d.f | P-value | |||
| Intercept | 1 | 3827 | 2952.95 | <0.0001 | |
| Time | 14 | 3827 | 12.42 | <0.0001 | |
| N.d.f: Numerator degree of freedom, D.d.f: Denominator degree of freedom. | |||||
| (B) | |||||
| Time | Sample size ( | Estimate (meter) | Standard Error | Lower CL | Upper CL |
| Day 2 | 280 | 0.83 | 0.027 | 0.78 | 0.88 |
| Day 4 | 280 | 0.84 | 0.027 | 0.79 | 0.89 |
| Day 6 | 280 | 0.96 | 0.027 | 0.90 | 1.01 |
| Day 8 | 280 | 1.01 | 0.027 | 0.95 | 1.06 |
| Day 10 | 280 | 1.05 | 0.027 | 1.00 | 1.10 |
| Day 12 | 280 | 1.06 | 0.027 | 1.00 | 1.11 |
| Day 14 | 280 | 0.99 | 0.027 | 0.93 | 1.04 |
| Day 16 | 280 | 1.06 | 0.027 | 1.01 | 1.12 |
| Day 18 | 280 | 1.02 | 0.027 | 0.97 | 1.06 |
| Day 20 | 280 | 1.12 | 0.027 | 1.06 | 1.17 |
| Day 22 | 280 | 1.12 | 0.027 | 1.06 | 1.17 |
| Day 24 | 280 | 1.04 | 0.027 | 1.00 | 1.10 |
| Day 26 | 280 | 0.97 | 0.027 | 0.92 | 1.02 |
| Day 26 | 280 | 1.01 | 0.028 | 0.96 | 1.07 |
| Day 30 | 280 | 0.95 | 0.028 | 0.90 | 1.01 |
| CL: Confidence Level | |||||
Fig. 2Generic time-response function of the movement distance of B. attramentaria. The predicted variable-response derived from the linear mixed-model test, specifying random intercept for subject, with N = 280 individuals split into groups of snails observed over 30 days. The solid and dashed black curves represent the statistically significant and insignificant difference between two means, respectively. The bottom and top of the box are the 25th and 75th percentile of the movement distance, the straight dash lines show the 50th percentile, and the ends of the whiskers represent the minimum and maximum estimates of the movement distance. Outliers are represented by black circles beyond the whiskers.
Tukey post-hoc test of the Linear Mixed-effect models for predictor of the time variable. This data are visually illustrated in Fig. 2.
| Contrast | Estimate (meter) | Standard Error | D.f | ||
|---|---|---|---|---|---|
| Day 2–Day 4 | −0.01 | 0.26 | 3827 | −0.39 | 1.0000 |
| Day 4–Day 6 | −0.12 | 0.03 | 3827 | −4.61 | 0.0004 |
| Day 6–Day 8 | −0.05 | 0.03 | 3827 | −1.88 | 0.8641 |
| Day 8–Day 10 | −0.04 | 0.03 | 3827 | −1.70 | 0.9333 |
| Day 10–Day 12 | −0.01 | 0.03 | 3827 | −0.30 | 1.0000 |
| Day 12–Day 14 | 0.07 | 0.03 | 3827 | 2.79 | 0.2526 |
| Day 14–Day 16 | −0.08 | 0.03 | 3827 | −3.02 | 0.1452 |
| Day 16–Day 18 | 0.04 | 0.03 | 3827 | 1.63 | 0.9529 |
| Day 18–Day 20 | −0.09 | 0.03 | 3827 | −3.66 | 0.0205 |
| Day 20–Day 22 | 0.00 | 0.03 | 3827 | 0.01 | 1.0000 |
| Day 22–Day 24 | 0.07 | 0.03 | 3827 | 2.83 | 0.2414 |
| Day 24–Day 26 | 0.07 | 0.03 | 3827 | 2.83 | 0.2316 |
| Day 26–Day 28 | −0.04 | 0.03 | 3827 | −1.56 | 0.9671 |
| Day 28–Day 30 | 0.06 | 0.03 | 3827 | 2.12 | 0.7198 |
| Day 2–Day 30 | −0.12 | 0.03 | 3827 | −4.08 | 0.0042 |
⁎⁎⁎ indicates P < 0.001.
indicates 0.001 < P < 0.01.
indicates 0.01 < P < 0.05.
| Subject | Biological sciences, Marine Biology, and Ecology |
| Specific subject area | Locomotor response and Adaptive locomotion |
| Type of data | Video |
| How data were acquired | Instruments: Sony NXCAM camera (AVCHD Progressive MPEG2 SD), AVS Video Editor v.7.1.2.262, Avidemux v.2.6.12, Spectral Time-Lapse (STL) toolbox, Matlab release R2014a |
| Data format | Raw (Videos, texts, and images deposited to Mendeley database) |
| Parameters for data collection | The locomotor videos were produced by recording the snails’ movement when exposed to different artificial salinity regimes of 13, 23, 33, and 43 PSU. All snails were kept at 25 °C and a 12h Light:12h Dark photocycle. |
| Description of data collection | Snails were recorded for 1 hour every 2 days throughout 30-day acclimation experiments using Sony NXCAM camera (AVCHD Progressive MPEG2 SD). All videos were then saved in computer for further analyses. Later, a series of computer software such as AVS Video Editor v.7.1.2.262, Avidemux v.2.6.12, and Spectral Time-Lapse (STL) toolbox implemented in Matlab release R2014a were used to increase the video playback rate, crop videos, track the movement trail, and to measure the movement distances of the snails respectively. The final products of this process were locomotor videos, texts containing distance movement, and movement images which were deposited to the Mendeley database. |
| Data source location | City/Town/Region: Hacheon, Cheollabuk-do |
| Data accessibility | With the article |
| Related research article | P.-T. Ho, H. Q. Nguyen, E. M. A. Kern, and Y.-J. Won, Locomotor responses to salt stress in native and invasive mud-tidal gastropod populations (Batillaria), Ecol. and Evol. 11, 458-470 (2020). |