| Literature DB >> 34035901 |
Atma Gunawan1,2, Jonny Karunia Fajar2, Fredo Tamara2, Aditya Indra Mahendra2, Muhammad Ilmawan3, Yeni Purnamasari3, Dessy Aprilia Kartini3, Eden Suryoiman Winoto2, Efriko Septananda Saifillah2, Dewi Sri Wulandari2, Pratista Adi Krisna2, Ema Dianita Mayasari2, Tri Wahyudi Iman Dantara2, Ramadi Satryo Wicaksono2,4, Djoko Wahono Soeatmadji5.
Abstract
Background: While it has been known that the development of chronic kidney disease (CKD) and age-related cognitive impairment involves several mediators, the evidence in clinical practice only reveals nitride oxide synthase (NOS) and klotho. However, the evidence for this topic is conflicted. The aim of this study was to assess the role of NOS and klotho single nucleotide polymorphisms (SNPs) in the pathogenesis of CKD and age-related cognitive impairment.Entities:
Keywords: Nitride oxide synthase; age-related cognitive impairment; chronic kidney disease; klotho
Year: 2020 PMID: 34035901 PMCID: PMC8112466 DOI: 10.12688/f1000research.22989.2
Source DB: PubMed Journal: F1000Res ISSN: 2046-1402
Figure 1. PRISMA flowchart of paper selection in our study.
Figure 2. Forest plot of the association between NOS3 G894T gene polymorphism and the risk of age-related cognitive impairment.
( A). GG vs. GT+TT; ( B). GT vs. GG+TT.
Summary of the association between the risk of age-related cognitive impairment and both NOS3 and KL gene polymorphisms.
| SNP | Allele & genotype | NS | Model | Value | OR | 95%CI | pHet | pE | p-value | |
|---|---|---|---|---|---|---|---|---|---|---|
| Case (%) | Control (%) | |||||||||
|
| G vs. T | 21 | Random | 75.3 | 75.1 | 1.08 | 0.99 - 1.18 | 0.0460 | 0.1210 | 0.0840 |
| T vs. G | 21 | Random | 24.7 | 24.9 | 0.92 | 0.85 - 1.01 | 0.0460 | 0.1210 | 0.0840 | |
| GG vs. GT+TT | 21 | Random | 58.2 | 57.1 | 1.14 | 1.01 - 1.30 | 0.0100 | 0.1890 | 0.0320 | |
| GT vs. GG+TT | 21 | Random | 34.2 | 36.0 | 0.86 | 0.75 - 0.97 | 0.0060 | 0.2010 | 0.0170 | |
| TT vs. GG+GT | 21 | Fixed | 7.6 | 6.9 | 1.04 | 0.89 - 1.22 | 0.6770 | <0.0001 | 0.6100 | |
|
| T vs. C | 3 | Fixed | 75.7 | 80.2 | 0.93 | 0.81 - 1.07 | 0.6130 | <0.0001 | 0.3010 |
| C vs. T | 3 | Fixed | 24.3 | 19.8 | 1.08 | 0.94 - 1.24 | 0.6130 | <0.0001 | 0.3010 | |
| TT vs. TC+CC | 3 | Fixed | 60.0 | 66.1 | 0.94 | 0.79 - 1.13 | 0.4960 | <0.0001 | 0.5120 | |
| TC vs. TT+CC | 3 | Fixed | 31.3 | 28.1 | 1.00 | 0.84 - 1.19 | 0.5520 | <0.0001 | 0.9980 | |
| CC vs. TT+TC | 3 | Fixed | 8.7 | 5.8 | 1.20 | 0.88 - 1.64 | 0.6970 | <0.0001 | 0.2500 | |
|
| G vs. A | 5 | Random | 84.6 | 84.7 | 0.93 | 0.73 - 1.18 | 0.0160 | 0.2210 | 0.5350 |
| A vs. G | 5 | Random | 15.4 | 15.3 | 1.08 | 0.85 - 1.37 | 0.0160 | 0.2210 | 0.5350 | |
| GG vs. GA+AA | 5 | Random | 70.3 | 71.1 | 0.92 | 0.72 - 1.16 | 0.0450 | 0.2070 | 0.4730 | |
| GA vs. GG+AA | 5 | Fixed | 28.6 | 27.2 | 1.08 | 0.93 - 1.26 | 0.2520 | 0.1020 | 0.3060 | |
| AA vs. GG+GA | 3 | Random | 1.1 | 1.7 | 1.05 | 0.34 - 3.27 | 0.0280 | 0.8490 | 0.9270 | |
SNP, single nucleotide polymorphism; NS, number of studies; OR, odd ratio; pHet, p heterogeneity; pE, p Egger.
Figure 3. Forest plot of the association between NOS3 gene polymorphism and the risk of CKD.
A). 4a4a vs. 4b4b+4b4a of NOS3 4b/4a; B). T vs. G of NOS3 G-894T; C). TT vs. GG+GT of NOS3 G-894T.
Figure 4. Forest plot of the association between KL G395A gene polymorphism and the risk of CKD.
( A). A vs. G of KL G-395A; ( B). GA vs. GG+AA of KL G395A.
Summary of the association between the risk of CKD and both NOS3 and KL gene polymorphisms.
| SNP | Allele & genotype | NS | Model | Value | OR | 95%CI | pHet | pE | p-value | |
|---|---|---|---|---|---|---|---|---|---|---|
| Case (%) | Control (%) | |||||||||
|
| 4b vs. 4a | 10 | Random | 83.5 | 86.4 | 0.80 | 0.60 - 1.07 | <0.0001 | 0.4140 | 0.1300 |
| 4a vs. 4b | 10 | Random | 16.5 | 13.6 | 1.25 | 0.94 - 1.68 | <0.0001 | 0.4140 | 0.1300 | |
| 4b4b vs. 4b4a+4a4a | 10 | Random | 70.6 | 74.8 | 0.81 | 0.59 - 1.12 | <0.0001 | 0.4490 | 0.2000 | |
| 4b4a vs. 4b4b+4a4a | 10 | Random | 25.7 | 23.1 | 1.13 | 0.86 - 1.48 | <0.0001 | 0.3610 | 0.3950 | |
| 4a4a vs. 4b4b+4b4a | 9 | Fixed | 3.7 | 2.1 | 2.09 | 1.43 - 3.06 | 0.1170 | 0.5110 | <0.0001 | |
|
| G vs. T | 7 | Random | 69.1 | 80.2 | 0.61 | 0.45 - 0.82 | 0.0030 | 0.3310 | 0.0010 |
| T vs. G | 7 | Random | 30.9 | 19.8 | 1.65 | 1.22 - 2.23 | 0.0030 | 0.3310 | 0.0010 | |
| GG vs. GT+TT | 7 | Random | 51.0 | 66.0 | 0.59 | 0.42 - 0.84 | 0.0160 | 0.3570 | 0.0030 | |
| GT vs. GG+TT | 7 | Random | 36.3 | 28.3 | 1.29 | 0.87 - 1.93 | 0.0020 | 0.4470 | 0.2070 | |
| TT vs. GG+GT | 6 | Fixed | 12.7 | 5.7 | 2.08 | 1.46 - 2.97 | 0.3930 | 0.1010 | <0.0001 | |
|
| T vs. C | 3 | Random | 76.4 | 73.5 | 0.80 | 0.45 - 1.45 | 0.0040 | 0.4720 | 0.4710 |
| C vs. T | 3 | Random | 23.6 | 26.5 | 1.24 | 0.69 - 2.25 | 0.0040 | 0.4720 | 0.4710 | |
| TT vs. TC+CC | 3 | Random | 59.2 | 56.1 | 0.81 | 0.40 - 1.63 | 0.0090 | 0.5460 | 0.5570 | |
| TC vs. TT+CC | 3 | Random | 34.4 | 34.9 | 1.21 | 0.66 - 2.22 | 0.0290 | 0.4520 | 0.5340 | |
| CC vs. TT+TC | 3 | Fixed | 6.4 | 9.0 | 1.07 | 0.59 - 1.94 | 0.3240 | 0.2080 | 0.8280 | |
|
| G vs. A | 6 | Random | 74.2 | 84.4 | 0.40 | 0.20 - 0.77 | <0.0001 | 0.7720 | 0.0070 |
| A vs. G | 6 | Random | 25.8 | 15.6 | 2.53 | 1.29 - 4.96 | <0.0001 | 0.7720 | 0.0070 | |
| GG vs. GA+AA | 6 | Random | 56.0 | 70.0 | 0.36 | 0.17 - 0.76 | <0.0001 | 0.8660 | 0.0070 | |
| GA vs. GG+AA | 6 | Random | 36.4 | 28.7 | 2.08 | 1.16 - 3.72 | <0.0001 | 0.6230 | 0.0140 | |
| AA vs. GG+GA | 4 | Random | 7.6 | 1.2 | 2.96 | 0.84 - 10.42 | 0.0690 | 0.9400 | 0.0910 | |
|
| C vs. T | 3 | Fixed | 78.2 | 81.8 | 0.96 | 0.76 - 1.21 | 0.7020 | <0.0001 | 0.7160 |
| T vs. C | 3 | Fixed | 21.8 | 18.2 | 1.05 | 0.83 - 1.32 | 0.7020 | <0.0001 | 0.7160 | |
| CC vs. CT+TT | 3 | Fixed | 59.3 | 65.4 | 0.96 | 0.72 - 1.27 | 0.7000 | <0.0001 | 0.7600 | |
| CT vs. CC+TT | 3 | Fixed | 38.0 | 33.0 | 1.03 | 0.77 - 1.37 | 0.5620 | <0.0001 | 0.8530 | |
| TT vs. CC+T | 2 | Fixed | 2.8 | 1.7 | 1.05 | 0.42 - 2.63 | 0.1800 | 1.0130 | 0.9130 | |
SNP, single nucleotide polymorphism; NS, number of studies; OR, odd ratio; pHet, p heterogeneity; pE, p Egger.