| Literature DB >> 34033622 |
Mikael Anne Greenwood-Hickman1, Supun Nakandala2, Marta M Jankowska3, Dori E Rosenberg1, Fatima Tuz-Zahra4, John Bellettiere4, Jordan Carlson, Paul R Hibbing5, Jingjing Zou4, Andrea Z Lacroix4, Arun Kumar2, Loki Natarajan4.
Abstract
INTRODUCTION: Sitting patterns predict several healthy aging outcomes. These patterns can potentially be measured using hip-worn accelerometers, but current methods are limited by an inability to detect postural transitions. To overcome these limitations, we developed the Convolutional Neural Network Hip Accelerometer Posture (CHAP) classification method.Entities:
Mesh:
Year: 2021 PMID: 34033622 PMCID: PMC8516667 DOI: 10.1249/MSS.0000000000002705
Source DB: PubMed Journal: Med Sci Sports Exerc ISSN: 0195-9131
Definitions and interpretations of accuracy and error metrics.
| Confusion Matrix of Actual and Predicted 10-s Segments | ||
|---|---|---|
| Predicted Sitting | Predicted Nonsitting | |
| Actual sitting |
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| Actual nonsitting |
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†Refers to letters defined in the confusion matrix.
FIGURE 1Flow diagram from the ACT study for inclusion into this study and random division into training and testing data sets. 1Nonconcurrent wear represents data in which the devices are not worn concurrently. 2Drift is a phenomenon in which data collected from one device seems to gradually lose or gain time when compared with another device, such that, over time, the two data streams no longer align. See Figure, Supplemental Digital Content for an example of drift in this sample, http://links.lww.com/MSS/C335.
Participant characteristics for the full, training, validation, and test sets.
| Full Sample | Training | Validation | Test | |
|---|---|---|---|---|
| Characteristics | ||||
|
| ||||
| Age, yr | 76.70 (6.52) | 76.87 (6.38) | 76.60 (6.84) | 76.44 (6.64) |
| Sex |
| |||
| Female | 415 (58.5) | 234 (58.6) | 54 (55.7) | 127 (59.6) |
| Race ethnicity | ||||
| Hispanic or non-White | 70 (9.9) | 31 (7.8) | 16 (16.5) | 23 (10.9) |
| Education | ||||
| Less than high school | 10 (1.4) | 7 (1.8) | 1 (1.0) | 2 (0.9) |
| Completed high school | 52 (7.3) | 25 (6.3) | 8 (8.2) | 19 (8.9) |
| Some college | 113 (15.9) | 68 (17.0) | 13 (13.4) | 32 (15.0) |
| Completed college | 534 (75.3) | 299 (74.9) | 75 (77.3) | 160 (75.1) |
| BMI, kg·m−2 | ||||
| ≤29 | 537 (77.4) | 293 (74.7) | 81 (88.0) | 163 (77.6) |
| >29 | 157 (22.6) | 99 (25.3) | 11 (12.0) | 47 (22.4) |
| Self-rated health | ||||
| Good, poor, or very poor | 279 (39.4) | 164 (41.1) | 37 (38.1) | 78 (36.6) |
| Difficulty in walking half a mile | ||||
| Some or more | 168 (23.7) | 99 (24.8) | 21 (21.6) | 48 (22.5) |
Differences between training and validation sets and the test set were not statistically significant at the 5% level using two-sample t-test for continuous variables and χ2 test for categorical variables.
Test set performance of top 3 performing CNN models and ensemble CHAP at the 10-s level (mean (SD) of metrics).
| Models | Accuracy (%) | Balanced Accuracy (%) | Sitting Time MAPE (%) | Nonsitting Time MAPE (%) | Transition Sensitivity (Recall) % at 1-min Tolerance | Transition PPV (Precision) % at 1-min Tolerance |
|---|---|---|---|---|---|---|
| A | 93.5 (3.9) | 91.8 (4.7) | 5.3 | 7.7 | 76.7 (10.3) | 74.5 (12.6) |
| B | 93.7 (3.8) | 91.9 (5.1) | 5.2 | 8.7 | 76.2 (11.1) | 76.7 (12.3) |
| C | 93.7 (3.6) | 92.4 (4.2) | 5.5 | 9.8 | 75.8 (9.9) | 77.0 (11.6) |
| CHAP (ensemble) | 94.1 (3.6) | 92.6 (4.5) | 5.2 | 8.2 | 77.1 (10.8) | 80.0 (12.5) |
Detection of transitions within ±6 10-s epochs of ActiGraph data.
FIGURE 2Minute-level performance (balanced accuracy, sensitivity/recall, specificity) in classifying sitting vs not sitting comparing AG cut-point (pink), TLBC (blue), and CHAP (green).
FIGURE 3Person-level sitting pattern metrics (mean sitting bout duration, average daily sitting time in minutes, average daily number of sitting bouts) comparing activPAL (orange), AG cut-point (pink), TLBC (blue), and CHAP (green).
FIGURE 4Assessment of minute-level performance in timing of classification of sit-to-stand transitions within 1-min window (tolerance) using paired actual and predicted transitions for AG cut-point (pink), TLBC (blue), and CHAP (green).