Literature DB >> 34030087

Diversity-oriented synthesis as a tool to expand the chemical space of DNA-encoded libraries.

Elena Lenci1, Lorenzo Baldini1, Andrea Trabocchi2.   

Abstract

DNA-encoded libraries (DEL) represent a powerful technology for generating compound collections for drug discovery campaigns, that have allowed for the selection of many hit compounds over last three decades. However, the application of split-and-pool combinatorial methodologies, as well as the limitation imposed by DNA-compatible chemistry, has often brought to a limited exploration of the chemical space, with an over-representation of flat aromatic or peptide-like structures, whereas a higher scaffold complexity is generally associated with a more successful biological activity of the library. In this context, the application of Diversity-Oriented Synthesis, capable of creating sp3-rich molecular entities even starting from simple flat building blocks, can represent an efficient strategy to significantly broaden the chemical space explored by DELs. In this review, we present selected examples of DNA-compatible complexity-generating reactions that can be applied for the generation of DNA-encoded DOS libraries, including: (i) multicomponent reactions; (ii) C-H/C-X functionalization; (iii) tandem approaches; (iv) cycloadditions; (v) reactions introducing privileged elements. Also, selected case studies on the generation of DELs with high scaffold diversity are discussed, reporting their application in drug discovery programs.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Chemical libraries; Drug Discovery; Scaffold; Skeletal diversity; Small Molecules

Year:  2021        PMID: 34030087     DOI: 10.1016/j.bmc.2021.116218

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  2 in total

Review 1.  Recent advances in DNA-encoded dynamic libraries.

Authors:  Bingbing Shi; Yu Zhou; Xiaoyu Li
Journal:  RSC Chem Biol       Date:  2022-02-17

2.  Converting Double-Stranded DNA-Encoded Libraries (DELs) to Single-Stranded Libraries for More Versatile Selections.

Authors:  Yuhan Gui; Clara Shania Wong; Guixian Zhao; Chao Xie; Rui Hou; Yizhou Li; Gang Li; Xiaoyu Li
Journal:  ACS Omega       Date:  2022-03-24
  2 in total

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