Literature DB >> 34024323

Artificial Intelligence in Pathology.

Sebastian Försch1, Frederick Klauschen, Peter Hufnagl, Wilfried Roth.   

Abstract

BACKGROUND: Increasing digitalization enables the use of artificial intelligence (AI) and machine learning in pathology. However, these technologies have only just begun to be implemented, and no randomized prospective trials have yet shown a benefit of AI-based diagnosis. In this review, we present current concepts, illustrate them with examples from representative publications, and discuss the possibilities and limitations of their use.
METHODS: This article is based on the results of a search in PubMed for articles published between January 1950 and January 2020 containing the searching terms "artificial intelligence," "deep learning," and "digital pathology," as well as the authors' own research findings.
RESULTS: Current research on AI in pathology focuses on supporting routine diagnosis and on prognostication, particularly for patients with cancer. Initial data indicate that pathologists can arrive at a diagnosis faster and more accurately with the aid of a computer. In a pilot study on the diagnosis of breast cancer, involving 70 patients, sensitivity for the detection of micrometastases rose from 83.3% (by a pathologist alone) to 91.2% (by a pathologist combined with a computer algorithm). The evidence likewise suggests that AI applied to histomorphological properties of cells during microscopy may enable the inference of certain genetic properties, such as mutations in key genes and deoxyribonucleic acid (DNA) methylation profiles.
CONCLUSION: Initial proof-of-concept studies for AI in pathology are now available. Randomized, prospective studies are now needed so that these early findings can be confirmed or falsified.

Entities:  

Mesh:

Year:  2021        PMID: 34024323      PMCID: PMC8278129          DOI: 10.3238/arztebl.m2021.0011

Source DB:  PubMed          Journal:  Dtsch Arztebl Int        ISSN: 1866-0452            Impact factor:   5.594


  25 in total

Review 1.  [Molecular pathology of colorectal cancer].

Authors:  J H L Neumann; A Jung; T Kirchner
Journal:  Pathologe       Date:  2015-03       Impact factor: 1.011

2.  Histomorphological and molecular profiling: friends not foes! Morpho-molecular analysis reveals agreement between histological and molecular profiling.

Authors:  Michael Hoberger; Maximilian von Laffert; Daniel Heim; Frederick Klauschen
Journal:  Histopathology       Date:  2019-09-05       Impact factor: 5.087

3.  Diagnostic Assessment of Deep Learning Algorithms for Detection of Lymph Node Metastases in Women With Breast Cancer.

Authors:  Babak Ehteshami Bejnordi; Mitko Veta; Paul Johannes van Diest; Bram van Ginneken; Nico Karssemeijer; Geert Litjens; Jeroen A W M van der Laak; Meyke Hermsen; Quirine F Manson; Maschenka Balkenhol; Oscar Geessink; Nikolaos Stathonikos; Marcory Crf van Dijk; Peter Bult; Francisco Beca; Andrew H Beck; Dayong Wang; Aditya Khosla; Rishab Gargeya; Humayun Irshad; Aoxiao Zhong; Qi Dou; Quanzheng Li; Hao Chen; Huang-Jing Lin; Pheng-Ann Heng; Christian Haß; Elia Bruni; Quincy Wong; Ugur Halici; Mustafa Ümit Öner; Rengul Cetin-Atalay; Matt Berseth; Vitali Khvatkov; Alexei Vylegzhanin; Oren Kraus; Muhammad Shaban; Nasir Rajpoot; Ruqayya Awan; Korsuk Sirinukunwattana; Talha Qaiser; Yee-Wah Tsang; David Tellez; Jonas Annuscheit; Peter Hufnagl; Mira Valkonen; Kimmo Kartasalo; Leena Latonen; Pekka Ruusuvuori; Kaisa Liimatainen; Shadi Albarqouni; Bharti Mungal; Ami George; Stefanie Demirci; Nassir Navab; Seiryo Watanabe; Shigeto Seno; Yoichi Takenaka; Hideo Matsuda; Hady Ahmady Phoulady; Vassili Kovalev; Alexander Kalinovsky; Vitali Liauchuk; Gloria Bueno; M Milagro Fernandez-Carrobles; Ismael Serrano; Oscar Deniz; Daniel Racoceanu; Rui Venâncio
Journal:  JAMA       Date:  2017-12-12       Impact factor: 56.272

4.  Machine learning analysis of DNA methylation profiles distinguishes primary lung squamous cell carcinomas from head and neck metastases.

Authors:  Philipp Jurmeister; Michael Bockmayr; Philipp Seegerer; Teresa Bockmayr; Denise Treue; Grégoire Montavon; Claudia Vollbrecht; Alexander Arnold; Daniel Teichmann; Keno Bressem; Ulrich Schüller; Maximilian von Laffert; Klaus-Robert Müller; David Capper; Frederick Klauschen
Journal:  Sci Transl Med       Date:  2019-09-11       Impact factor: 17.956

5.  Quantitative tumor cytochemistry--G.H.A. Clowes Memorial Lecture.

Authors:  T O Caspersson
Journal:  Cancer Res       Date:  1979-07       Impact factor: 12.701

Review 6.  Artificial intelligence in digital pathology - new tools for diagnosis and precision oncology.

Authors:  Kaustav Bera; Kurt A Schalper; David L Rimm; Vamsidhar Velcheti; Anant Madabhushi
Journal:  Nat Rev Clin Oncol       Date:  2019-08-09       Impact factor: 66.675

7.  Clinical-grade computational pathology using weakly supervised deep learning on whole slide images.

Authors:  Gabriele Campanella; Matthew G Hanna; Luke Geneslaw; Allen Miraflor; Vitor Werneck Krauss Silva; Klaus J Busam; Edi Brogi; Victor E Reuter; David S Klimstra; Thomas J Fuchs
Journal:  Nat Med       Date:  2019-07-15       Impact factor: 53.440

8.  Deep learning based tissue analysis predicts outcome in colorectal cancer.

Authors:  Dmitrii Bychkov; Nina Linder; Riku Turkki; Stig Nordling; Panu E Kovanen; Clare Verrill; Margarita Walliander; Mikael Lundin; Caj Haglund; Johan Lundin
Journal:  Sci Rep       Date:  2018-02-21       Impact factor: 4.379

9.  Predicting cancer outcomes from histology and genomics using convolutional networks.

Authors:  Pooya Mobadersany; Safoora Yousefi; Mohamed Amgad; David A Gutman; Jill S Barnholtz-Sloan; José E Velázquez Vega; Daniel J Brat; Lee A D Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-12       Impact factor: 11.205

10.  Co-occurring gland angularity in localized subgraphs: predicting biochemical recurrence in intermediate-risk prostate cancer patients.

Authors:  George Lee; Rachel Sparks; Sahirzeeshan Ali; Natalie N C Shih; Michael D Feldman; Elaine Spangler; Timothy Rebbeck; John E Tomaszewski; Anant Madabhushi
Journal:  PLoS One       Date:  2014-05-29       Impact factor: 3.240

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  3 in total

1.  Make deep learning algorithms in computational pathology more reproducible and reusable.

Authors:  Sophia J Wagner; Christian Matek; Sayedali Shetab Boushehri; Melanie Boxberg; Lorenz Lamm; Ario Sadafi; Dominik J E Waibel; Carsten Marr; Tingying Peng
Journal:  Nat Med       Date:  2022-09       Impact factor: 87.241

2.  Diagnostic Value of MAML2 Rearrangements in Mucoepidermoid Carcinoma.

Authors:  Julia C Thierauf; Alex A Farahani; B Iciar Indave; Adam Z Bard; Valerie A White; Cameron R Smith; Hetal Marble; Martin D Hyrcza; John K C Chan; Justin Bishop; Qiuying Shi; Kim Ely; Abbas Agaimy; Maria Martinez-Lage; Vania Nose; Miguel Rivera; Valentina Nardi; Dora Dias-Santagata; Salil Garg; Peter Sadow; Long P Le; William Faquin; Lauren L Ritterhouse; Ian A Cree; A John Iafrate; Jochen K Lennerz
Journal:  Int J Mol Sci       Date:  2022-04-13       Impact factor: 6.208

3.  Global Research Trends of Artificial Intelligence on Histopathological Images: A 20-Year Bibliometric Analysis.

Authors:  Wentong Zhou; Ziheng Deng; Yong Liu; Hui Shen; Hongwen Deng; Hongmei Xiao
Journal:  Int J Environ Res Public Health       Date:  2022-09-15       Impact factor: 4.614

  3 in total

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