Literature DB >> 34015595

Robust classification from noisy labels: Integrating additional knowledge for chest radiography abnormality assessment.

Sebastian Gündel1, Arnaud A A Setio2, Florin C Ghesu3, Sasa Grbic3, Bogdan Georgescu3, Andreas Maier4, Dorin Comaniciu3.   

Abstract

Chest radiography is the most common radiographic examination performed in daily clinical practice for the detection of various heart and lung abnormalities. The large amount of data to be read and reported, with more than 100 studies per day for a single radiologist, poses a challenge in consistently maintaining high interpretation accuracy. The introduction of large-scale public datasets has led to a series of novel systems for automated abnormality classification. However, the labels of these datasets were obtained using natural language processed medical reports, yielding a large degree of label noise that can impact the performance. In this study, we propose novel training strategies that handle label noise from such suboptimal data. Prior label probabilities were measured on a subset of training data re-read by 4 board-certified radiologists and were used during training to increase the robustness of the training model to the label noise. Furthermore, we exploit the high comorbidity of abnormalities observed in chest radiography and incorporate this information to further reduce the impact of label noise. Additionally, anatomical knowledge is incorporated by training the system to predict lung and heart segmentation, as well as spatial knowledge labels. To deal with multiple datasets and images derived from various scanners that apply different post-processing techniques, we introduce a novel image normalization strategy. Experiments were performed on an extensive collection of 297,541 chest radiographs from 86,876 patients, leading to a state-of-the-art performance level for 17 abnormalities from 2 datasets. With an average AUC score of 0.880 across all abnormalities, our proposed training strategies can be used to significantly improve performance scores.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Chest radiography abnormality classification; Label noise; Multi-task learning; Robust loss function

Year:  2021        PMID: 34015595     DOI: 10.1016/j.media.2021.102087

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  3 in total

1.  Value of quantitative airspace disease measured on chest CT and chest radiography at initial diagnosis compared to clinical variables for prediction of severe COVID-19.

Authors:  Hae-Min Jung; Rochelle Yang; Warren B Gefter; Florin C Ghesu; Boris Mailhe; Awais Mansoor; Sasa Grbic; Dorin Comaniciu; Sebastian Vogt; Eduardo J Mortani Barbosa
Journal:  J Med Imaging (Bellingham)       Date:  2022-06-17

2.  Deep learning-based patient re-identification is able to exploit the biometric nature of medical chest X-ray data.

Authors:  Kai Packhäuser; Sebastian Gündel; Nicolas Münster; Christopher Syben; Vincent Christlein; Andreas Maier
Journal:  Sci Rep       Date:  2022-09-01       Impact factor: 4.996

3.  Part-Aware Mask-Guided Attention for Thorax Disease Classification.

Authors:  Ruihua Zhang; Fan Yang; Yan Luo; Jianyi Liu; Jinbin Li; Cong Wang
Journal:  Entropy (Basel)       Date:  2021-05-23       Impact factor: 2.524

  3 in total

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