Literature DB >> 3401456

Isotope effect studies of chicken liver NADP malic enzyme: role of the metal ion and viscosity dependence.

C B Grissom1, W W Cleland.   

Abstract

The role of the metal ion in the oxidative decarboxylation of malate by chicken liver NADP malic enzyme and details of the reaction mechanism have been investigated by 13C isotope effects. With saturating NADP and the indicated metal ion at a total concentration 10-fold higher than its Km, the following primary 13C kinetic isotope effects at C4 of malate [13(V/Kmal)] were observed at pH 8.0: Mg2+, 1.0336; Mn2+, 1.0365; Cd2+, 1.0366; Zn2+, 1.0337; Co2+, 1.0283; Ni2+, 1.025. Knowing the partitioning of the intermediate oxalacetate between decarboxylation to pyuvate and reduction to malate allows calculation of the intrinsic carbon isotope effect for decarboxylation. For Mg2+ as activator, this was 1.049 with NADP and 1.046 with 3-acetylpyridine adenine dinucleotide phosphate, although the intrinsic primary deuterium isotope effects on dehydrogenation were 5.6 and 4.2, and the partition ratios of the oxalacetate intermediate for decarboxylation as opposed to hydride transfer were 0.11 and 3.96 (the result of the different redox potentials of NADP and the acetylpyridine analogue). The close agreement of the intrinsic 13C isotope effects with each other and with the 13C isotope effect for the Mg2+-catalyzed nonenzymatic decarboxylation of oxalacetate of 1.0489 [Grissom, C. B., & Cleland, W. W. (1986) J. Am. Chem. Soc. 108, 5582] indicates a similarity of transition states for these reactions. It was not possible to calculate reasonable intrinsic carbon isotope effects with the other metal ions by use of the partitioning ratio of oxalacetate because of decarboxylation by another mechanism.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1988        PMID: 3401456     DOI: 10.1021/bi00408a039

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Site-directed mutagenesis and substrate-induced inactivation of beta-lactamase I.

Authors:  S J Thornewell; S G Waley
Journal:  Biochem J       Date:  1992-12-15       Impact factor: 3.857

2.  Mechanistic Insights into Dye-Decolorizing Peroxidase Revealed by Solvent Isotope and Viscosity Effects.

Authors:  Ruben Shrestha; Gaochao Huang; David A Meekins; Brian V Geisbrecht; Ping Li
Journal:  ACS Catal       Date:  2017-08-09       Impact factor: 13.084

3.  Purification and characterization of a malic enzyme from the ruminal bacterium Streptococcus bovis ATCC 15352 and cloning and sequencing of its gene.

Authors:  S Kawai; H Suzuki; K Yamamoto; M Inui; H Yukawa; H Kumagai
Journal:  Appl Environ Microbiol       Date:  1996-08       Impact factor: 4.792

4.  Duck liver 'malic' enzyme. Expression in Escherichia coli and characterization of the wild-type enzyme and site-directed mutants.

Authors:  R Y Hsu; M J Glynias; J Satterlee; R Feeney; A R Clarke; D C Emery; B A Roe; R K Wilson; A G Goodridge; J J Holbrook
Journal:  Biochem J       Date:  1992-06-15       Impact factor: 3.857

5.  Role of the divalent metal ion in the NAD:malic enzyme reaction: an ESEEM determination of the ground state conformation of malate in the E:Mn:malate complex.

Authors:  P A Tipton; T P Quinn; J Peisach; P F Cook
Journal:  Protein Sci       Date:  1996-08       Impact factor: 6.725

  5 in total

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