Literature DB >> 34014398

Integrated study of circRNA, lncRNA, miRNA, and mRNA networks in mediating the effects of testicular heat exposure.

Ke Hu1, Chaofan He1, Xunying Sun1, Longhui Li1, Yifan Xu1, Kejia Zhang1, Xiaohua Liu2, Meng Liang3.   

Abstract

The World Health Organization has recognized that testicular function is temperature dependent. Testicular heat exposure caused by occupational factors, lifestyle, and clinical diseases can lead to different degrees of reproductive problems. The aim of this study was to reveal the transcriptional regulatory network and its potential crucial roles in mediating the effects of testicular heat exposure. Testicular tissue was collected from a group of mice subjected to scrotal heat exposure as well as a control group. RNA was isolated from both groups and used for high-throughput sequencing. Using differential transcriptome expression analysis, 172 circRNAs, 279 miRNAs, 465 lncRNAs, and 2721 mRNAs were identified as significantly differentially expressed in mouse testicular tissue after heat exposure compared with the control group. Through Gene Ontology (GO) term and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses, differentially expressed lncRNAs and mRNAs were found to have potentially important functions in meiotic cell cycle (GO:0051321), cytoplasm (GO:0005737), membrane raft (GO:0045121), MAPK signaling (mmu04010), purine metabolism (mmu00230), and homologous recombination (mmu03440). Some of the most upregulated and downregulated lncRNAs and circRNAs were predicted to be associated with numerous miRNAs and mRNAs through competing endogenous RNA regulatory network analysis, which were validated with molecular biology experiments. This research provides high-throughput sequencing data of a testicular heat exposure model and lays the foundation for further study on circRNAs, miRNAs, and lncRNAs that are involved in male reproductive diseases related to elevated testicular temperature.
© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Heat exposure; Testis; circRNA; lncRNA; miRNA

Mesh:

Substances:

Year:  2021        PMID: 34014398     DOI: 10.1007/s00441-021-03474-z

Source DB:  PubMed          Journal:  Cell Tissue Res        ISSN: 0302-766X            Impact factor:   5.249


  40 in total

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Authors:  Damayanthi Durairajanayagam; Ashok Agarwal; Chloe Ong
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Review 2.  The Cytoskeleton in Spermatogenesis.

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Journal:  Reproduction       Date:  2018-12-01       Impact factor: 3.906

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Journal:  Nat Biotechnol       Date:  2015-03       Impact factor: 54.908

4.  Protective effects of camel whey protein against scrotal heat-mediated damage and infertility in the mouse testis through YAP/Nrf2 and PPAR-gamma signaling pathways.

Authors:  Gamal Badr; Hanem S Abdel-Tawab; Nancy K Ramadan; Samia F Ahmed; Mohamed H Mahmoud
Journal:  Mol Reprod Dev       Date:  2018-05-03       Impact factor: 2.609

5.  Cryopreservation of Human Testicular Tissue by Isopropyl-Controlled Slow Freezing.

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Journal:  Methods Mol Biol       Date:  2018

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Authors:  Marc R Friedländer; Sebastian D Mackowiak; Na Li; Wei Chen; Nikolaus Rajewsky
Journal:  Nucleic Acids Res       Date:  2011-09-12       Impact factor: 16.971

7.  The Golgi Glycoprotein MGAT4D is an Intrinsic Protector of Testicular Germ Cells From Mild Heat Stress.

Authors:  Ayodele Akintayo; Meng Liang; Boris Bartholdy; Frank Batista; Jennifer Aguilan; Jillian Prendergast; Afsana Sabrin; Subha Sundaram; Pamela Stanley
Journal:  Sci Rep       Date:  2020-02-07       Impact factor: 4.379

8.  Effect of Heat Stress on Sperm DNA: Protamine Assessment in Ram Spermatozoa and Testicle.

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Journal:  Oxid Med Cell Longev       Date:  2018-03-25       Impact factor: 6.543

9.  Transciptome profiling at early infection of Elaeis guineensis by Ganoderma boninense provides novel insights on fungal transition from biotrophic to necrotrophic phase.

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Journal:  BMC Plant Biol       Date:  2018-12-29       Impact factor: 4.215

10.  A long noncoding RNA acts as a post-transcriptional regulator of heat shock protein (HSP70) synthesis in the cold hardy Diamesa tonsa under heat shock.

Authors:  Paola Bernabò; Gabriella Viero; Valeria Lencioni
Journal:  PLoS One       Date:  2020-04-02       Impact factor: 3.240

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  3 in total

1.  Overexpression of lncRNA-Gm2044 in spermatogonia impairs spermatogenesis in partial seminiferous tubules.

Authors:  Ke Hu; Yuanyuan Gao; Yifan Xu; Chaofan He; Kaixian Wang; Leina Li; Yaping Liao; Xiaohua Liu; Meng Liang
Journal:  Poult Sci       Date:  2022-04-27       Impact factor: 4.014

2.  The Preventive Effect of Cardiac Sympathetic Denervation Induced by 6-OHDA on Myocardial Ischemia-Reperfusion Injury: The Changes of lncRNA/circRNAs-miRNA-mRNA Network of the Upper Thoracic Spinal Cord in Rats.

Authors:  Zhixiao Li; Yujuan Li; Zhigang He; Zhen Li; Weiguo Xu; HongBing Xiang
Journal:  Oxid Med Cell Longev       Date:  2021-11-29       Impact factor: 6.543

3.  Identification of potentially functional circRNAs and prediction of circRNA-miRNA-mRNA regulatory network in periodontitis: Bridging the gap between bioinformatics and clinical needs.

Authors:  Weijun Yu; Qisheng Gu; Di Wu; Weiqi Zhang; Gang Li; Lu Lin; Jared M Lowe; Shucheng Hu; Tia Wenjun Li; Zhen Zhou; Michael Z Miao; Yuhua Gong; Yifei Zhao; Eryi Lu
Journal:  J Periodontal Res       Date:  2022-04-06       Impact factor: 3.946

  3 in total

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