Literature DB >> 34005918

Spatial extent of a single lipid's influence on bilayer mechanics.

Kayla C Sapp1, Andrew H Beaven1,2, Alexander J Sodt1.   

Abstract

To what spatial extent does a single lipid affect the mechanical properties of the membrane that surrounds it? The lipid composition of a membrane determines its mechanical properties. The shapes available to the membrane depend on its compositional material properties, and therefore, the lipid environment. Because each individual lipid species' chemistry is different, it is important to know its range of influence on membrane mechanical properties. This is defined herein as the lipid's mechanical extent. Here, a lipid's mechanical extent is determined by quantifying lipid redistribution and the average curvature that lipid species experience on fluctuating membrane surfaces. A surprising finding is that, unlike unsaturated lipids, saturated lipids have a complicated, nonlocal effect on the surrounding surface, with the interaction strength maximal at a finite length-scale. The methodology provides the means to substantially enrich curvature-energy models of membrane structures, quantifying what was previously only conjecture.

Entities:  

Year:  2021        PMID: 34005918      PMCID: PMC8941725          DOI: 10.1103/PhysRevE.103.042413

Source DB:  PubMed          Journal:  Phys Rev E        ISSN: 2470-0045            Impact factor:   2.529


  49 in total

1.  CHARMM-GUI: a web-based graphical user interface for CHARMM.

Authors:  Sunhwan Jo; Taehoon Kim; Vidyashankara G Iyer; Wonpil Im
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2.  Macroscopic phase separation, modulated phases, and microemulsions: a unified picture of rafts.

Authors:  Roie Shlomovitz; Lutz Maibaum; M Schick
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

3.  NMR studies on phospholipid bilayers. Some factors affecting lipid distribution.

Authors:  J A Berden; R W Barker; G K Radda
Journal:  Biochim Biophys Acta       Date:  1975-01-28

4.  Spontaneous curvature of phosphatidic acid and lysophosphatidic acid.

Authors:  Edgar E Kooijman; Vladimir Chupin; Nola L Fuller; Michael M Kozlov; Ben de Kruijff; Koert N J Burger; Peter R Rand
Journal:  Biochemistry       Date:  2005-02-15       Impact factor: 3.162

5.  CHARMM all-atom additive force field for sphingomyelin: elucidation of hydrogen bonding and of positive curvature.

Authors:  Richard M Venable; Alexander J Sodt; Brent Rogaski; Huan Rui; Elizabeth Hatcher; Alexander D MacKerell; Richard W Pastor; Jeffery B Klauda
Journal:  Biophys J       Date:  2014-07-01       Impact factor: 4.033

6.  Seeing the Forest in Lieu of the Trees: Continuum Simulations of Cell Membranes at Large Length Scales.

Authors:  Kayla Sapp; Roie Shlomovitz; Lutz Maibaum
Journal:  Annu Rep Comput Chem       Date:  2014-12-04

Review 7.  Mechanical properties of lipid bilayers from molecular dynamics simulation.

Authors:  Richard M Venable; Frank L H Brown; Richard W Pastor
Journal:  Chem Phys Lipids       Date:  2015-07-31       Impact factor: 3.329

8.  CHARMM-GUI Membrane Builder for mixed bilayers and its application to yeast membranes.

Authors:  Sunhwan Jo; Joseph B Lim; Jeffery B Klauda; Wonpil Im
Journal:  Biophys J       Date:  2009-07-08       Impact factor: 4.033

9.  Growth Conditions and Cell Cycle Phase Modulate Phase Transition Temperatures in RBL-2H3 Derived Plasma Membrane Vesicles.

Authors:  Erin M Gray; Gladys Díaz-Vázquez; Sarah L Veatch
Journal:  PLoS One       Date:  2015-09-14       Impact factor: 3.240

10.  CHARMM-GUI Input Generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM Simulations Using the CHARMM36 Additive Force Field.

Authors:  Jumin Lee; Xi Cheng; Jason M Swails; Min Sun Yeom; Peter K Eastman; Justin A Lemkul; Shuai Wei; Joshua Buckner; Jong Cheol Jeong; Yifei Qi; Sunhwan Jo; Vijay S Pande; David A Case; Charles L Brooks; Alexander D MacKerell; Jeffery B Klauda; Wonpil Im
Journal:  J Chem Theory Comput       Date:  2015-12-03       Impact factor: 6.006

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  2 in total

1.  Molecular mechanisms of spontaneous curvature and softening in complex lipid bilayer mixtures.

Authors:  Henry J Lessen; Kayla C Sapp; Andrew H Beaven; Rana Ashkar; Alexander J Sodt
Journal:  Biophys J       Date:  2022-08-04       Impact factor: 3.699

2.  Curvature-based sorting of eight lipid types in asymmetric buckled plasma membrane models.

Authors:  Elio A Cino; D Peter Tieleman
Journal:  Biophys J       Date:  2022-05-05       Impact factor: 3.699

  2 in total

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