Literature DB >> 34004233

Treasuring the computational approach in medicinal plant research.

Harshita Singh1, Navneeta Bharadvaja2.   

Abstract

Medicinal plants serve as a valuable source of secondary metabolites since time immemorial. Computational Research in 21st century is giving more attention to medicinal plants for new drug design as pharmacological screening of bioactive compound was time consuming and expensive. Computational methods such as Molecular Docking, Molecular Dynamic Simulation and Artificial intelligence are significant Insilico tools in medicinal plant research. Molecular docking approach exploits the mechanism of potential phytochemicals into the target active site to elucidate its interactions and biological therapeutic properties. MD simulation illuminates the dynamic behavior of biomolecules at atomic level with fine quality representation of biomolecules. Dramatical advancement in computer science is illustrating the biological mechanism via these tools in different diseases treatment. The advancement comprises speed, the system configuration, and other software upgradation to insights into the structural explanation and optimization of biomolecules. A probable shift from simulation to artificial intelligence has in fact accelerated the art of scientific study to a sky high. The most upgraded algorithm in artificial intelligence such as Artificial Neural Networks, Deep Neural Networks, Neuro-fuzzy Logic has provided a wide opportunity in easing the time required in classical experimental strategy. The notable progress in computer science technology has paved a pathway for understanding the pharmacological functions and creating a roadmap for drug design and development and other achievement in the field of medicinal plants research. This review focus on the development and overview in computational research moving from static molecular docking method to a range of dynamic simulation and an advanced artificial intelligence such as machine learning.
Copyright © 2021. Published by Elsevier Ltd.

Keywords:  AI (Artificial intelligence); Bioactive compounds; Docking; MD Simulation; Machine learning; Medicinal plants

Year:  2021        PMID: 34004233     DOI: 10.1016/j.pbiomolbio.2021.05.004

Source DB:  PubMed          Journal:  Prog Biophys Mol Biol        ISSN: 0079-6107            Impact factor:   3.667


  6 in total

Review 1.  From Traditional Ethnopharmacology to Modern Natural Drug Discovery: A Methodology Discussion and Specific Examples.

Authors:  Stergios Pirintsos; Athanasios Panagiotopoulos; Michalis Bariotakis; Vangelis Daskalakis; Christos Lionis; George Sourvinos; Ioannis Karakasiliotis; Marilena Kampa; Elias Castanas
Journal:  Molecules       Date:  2022-06-24       Impact factor: 4.927

2.  The Health Effects of Dietary Supplements.

Authors:  Alessandra Durazzo; Daniel Dias Rufino Arcanjo; Massimo Lucarini
Journal:  Evid Based Complement Alternat Med       Date:  2022-05-31       Impact factor: 2.650

3.  Computational Identification of Druggable Bioactive Compounds from Catharanthus roseus and Avicennia marina against Colorectal Cancer by Targeting Thymidylate Synthase.

Authors:  Md Rashedul Islam; Md Abdul Awal; Ahmed Khames; Mohammad A S Abourehab; Abdus Samad; Walid M I Hassan; Rahat Alam; Osman I Osman; Suza Mohammad Nur; Mohammad Habibur Rahman Molla; Abdulrasheed O Abdulrahman; Sultana Rajia; Foysal Ahammad; Md Nazmul Hasan; Ishtiaq Qadri; Bonglee Kim
Journal:  Molecules       Date:  2022-03-24       Impact factor: 4.411

4.  Molecular modeling piloted analysis for semicarbazone derivative of curcumin as a potent Abl-kinase inhibitor targeting colon cancer.

Authors:  Fiona C Rodrigues; Gangadhar Hari; K S R Pai; Akhil Suresh; Usha Y Nayak; N V Anilkumar; Goutam Thakur
Journal:  3 Biotech       Date:  2021-11-22       Impact factor: 2.406

5.  Structural-Guided Identification of Small Molecule Inhibitor of UHRF1 Methyltransferase Activity.

Authors:  Md Abdul Awal; Suza Mohammad Nur; Ali Khalaf Al Khalaf; Mohd Rehan; Aamir Ahmad; Salman Bakr I Hosawi; Hani Choudhry; Mohammad Imran Khan
Journal:  Front Genet       Date:  2022-08-03       Impact factor: 4.772

Review 6.  Potential Anti-Mycobacterium tuberculosis Activity of Plant Secondary Metabolites: Insight with Molecular Docking Interactions.

Authors:  Manu Kumar; Sandeep Kumar Singh; Prem Pratap Singh; Vipin Kumar Singh; Avinash Chandra Rai; Akhileshwar Kumar Srivastava; Livleen Shukla; Mahipal Singh Kesawat; Atul Kumar Jaiswal; Sang-Min Chung; Ajay Kumar
Journal:  Antioxidants (Basel)       Date:  2021-12-14
  6 in total

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