Literature DB >> 34003033

Genome Sequence Data of Three Formae Speciales of Phytophthora vignae Causing Phytophthora Stem Rot on Different Vigna Species.

Feifei Sun1,2, Suli Sun1, Wenwu Ye3, Canxing Duan1, Benjin Li4, Weixing Shan2, Zhendong Zhu1.   

Abstract

Phytophthora vignae is an important oomycete pathogen causing Phytophthora stem rot on some Vigna spp. Three P. vignae isolates obtained from mung bean, adzuki bean, and cowpea exhibited high similarities in morphology and physiology but are specialized to infect different hosts. Here, we report the first de novo assembly of the draft genomes of three P. vignae isolates, which were performed using the PacBio SMRT Sequel platform. This study will extend the genomic resource available for the Phytophthora genus and provide a good foundation for further research on comparative genomics of Phytophthora spp. and interaction mechanism between hosts and pathogens.

Entities:  

Keywords:  de novo assembly; field crops; genome resource; oilseeds and legumes; oomycetes

Mesh:

Year:  2021        PMID: 34003033     DOI: 10.1094/PDIS-11-20-2546-A

Source DB:  PubMed          Journal:  Plant Dis        ISSN: 0191-2917            Impact factor:   4.438


  1 in total

1.  Fully resolved assembly of Cryptosporidium parvum.

Authors:  Vipin K Menon; Pablo C Okhuysen; Cynthia L Chappell; Medhat Mahmoud; Medhat Mahmoud; Qingchang Meng; Harsha Doddapaneni; Vanesa Vee; Yi Han; Sejal Salvi; Sravya Bhamidipati; Kavya Kottapalli; George Weissenberger; Hua Shen; Matthew C Ross; Kristi L Hoffman; Sara Javornik Cregeen; Donna M Muzny; Ginger A Metcalf; Richard A Gibbs; Joseph F Petrosino; Fritz J Sedlazeck
Journal:  Gigascience       Date:  2022-02-15       Impact factor: 6.524

  1 in total

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