| Literature DB >> 33997275 |
Katherine L Imborek1, Matthew D Krasowski2, Paul Natvig3, Anna E Merrill2, Daniel J Diekema2,4, Bradley A Ford2.
Abstract
International travel has been a significant factor in the coronavirus disease 2019 pandemic. Many countries and airlines have implemented travel restrictions to limit the spread of the causative agent, severe acute respiratory syndrome coronavirus-2. A common requirement has been a negative reverse-transcriptase polymerase chain reaction performed by a clinical laboratory within 48 to 72 hours of departure. A more recent travel mandate for severe acute respiratory syndrome coronavirus-2 immunoglobulin M serology testing was instituted by the Chinese government on October 29, 2020. Pretravel testing for severe acute respiratory syndrome coronavirus-2 raises complications in terms of cost, turnaround time, and follow-up of positive results. In this report, we describe the experience of a multidisciplinary collaboration to develop a workflow for pretravel severe acute respiratory syndrome coronavirus-2 reverse-transcriptase polymerase chain reaction and immunoglobulin M serology testing at an academic medical center. The workflow primarily involved self-payment by patients and preferred retrieval of results by the patient through the electronic health record patient portal (Epic MyChart). A total of 556 unique patients underwent pretravel reverse-transcriptase polymerase chain reaction testing, with 13 (2.4%) having one or more positive results, a rate similar to that for reverse-transcriptase polymerase chain reaction testing performed for other protocol-driven asymptomatic screening (eg, inpatient admissions, preprocedural) at our medical center. For 5 of 13 reverse-transcriptase polymerase chain reaction positive samples, the traveler had clinical history, prior reverse-transcriptase polymerase chain reaction positive, and high cycle thresholds values on pretravel testing consistent with remote infection and minimal transmission risk. Severe acute respiratory syndrome coronavirus-2 immunoglobulin M was performed on only 24 patients but resulted in 2 likely false positives. Overall, our experience at an academic medical center shows the challenge with pretravel severe acute respiratory syndrome coronavirus-2 testing.Entities:
Keywords: antibodies; coronavirus disease 2019 nucleic acid testing; immunoglobulin M; polymerase chain reaction; serology; severe acute respiratory syndrome coronavirus-2
Year: 2021 PMID: 33997275 PMCID: PMC8110896 DOI: 10.1177/23742895211010247
Source DB: PubMed Journal: Acad Pathol ISSN: 2374-2895
Figure 1.Workflow for pretravel testing. (A) Process for patient to request testing through the patient appointment center. (B) Workflow for testing ordered through primary care physician. ILI indicates influenza-like illness; PCP, primary care physician; RT-PCR, reverse-transcriptase polymerase chain reaction.
Demographics and Characteristics of Patients Who Underwent RT-PCR Testing.*
| Variable | RT-PCR asymptomatic screening* | RT-PCR exposure and/or symptomatic* | Overall RT-PCR testing* |
|---|---|---|---|
| Number of unique patients (female/male/total) | 8379/8039/16 418 | 20 089/16 633/36 722 | 27 699/24 106/51 805 |
| Age in years (mean/median/range) | 44.7/47.3 (0.0->89) | 32.4/29.3 (0.0->89) | 36.1/32.8 (0.0->89 years) |
| Total number of tests | 32 125 | 48 553 | 80 678 |
| Unique patients with at least 1 positive result | 629 (3.8%) | 8755 (23.8%) | 9385 (18.1%) |
| Overall number of positive tests | 724 (2.3%) | 8,791 (18.1%) | 9515 (11.8%) |
| Overall number of indeterminate test results | 60 (0.2%) | 91 (0.2%) | 151 (0.2%) |
| Number of results viewed in MyChart | 15 002 (46.7%) | 39 225 (80.8%) | 54 463 (67.5%) |
Abbreviation: RT-PCR, reverse transcriptase polymerase.
* The overall data covered October 26, 2020, through January 29, 2021. “Asymptomatic Screening” encompasses orders in asymptomatic patients without known exposure as part of screening protocols such as inpatient admissions, preprocedural, or pretravel. “Exposure and/or Symptomatic” include all other orders based on possible COVID-19 symptoms and/or exposure to individuals with COVID-19 infection. There were 1335 patients who had testing in both categories.
Demographics and Characteristics of Patients Who Underwent Pretravel SARS-CoV-2 Testing Compared to Overall RT-PCR Testing.
| Variable | Pretravel RT-PCR* | Pretravel SARS-CoV-2 IgM* | SARS-CoV-2 total antibodies (not for travel)* |
|---|---|---|---|
| Number of unique patients (female/male/total) | 271/285/556 | 15/9/24 | 413/350/763 |
| Age in years (mean/median/range) | 38.9/37.3 (0.9-86 years) | 28.2/23.0 (2.5-59.9 years) | 44.2/43.6 (0.3->89 years) |
| Total number of tests | 582 | 27 | 787 |
| Unique patients with positive results | 13 (2.3%)† | 3 (12.5%) | 191 (25.0%)† |
| Number with previous positive RT-PCR result | 6 | 0 | 156 |
| Average days (SD) since previous positive | 43.7 (22.2) | NA | 4.4 (10.1) |
| Number with previous negative RT-PCR result | 3 | 3 | 249 |
| Overall number of positive tests | 13 (2.2%) | 6 (22.2%) | 194 (24.7%)§ |
| Overall number of indeterminate test results | 0 (0.0%) | NA | 41 (5.2%)§ |
| Number of results viewed in MyChart | 555 (95.4%) | 24 (88.9%) | 491 (62.4%) |
Abbreviations: IgM, immunoglobulin M; RT-PCR, reverse transcriptase polymerase; SARS-CoV-2, severe acute respiratory syndrome coronavirus-2; SD, standard deviation; UIHC, University of Iowa Hospitals and Clinic; NA, not applicable.
*Pretravel RT-PCR are orders where “pre-travel” was documented reason in order entry for the RT-PCR testing. SARS-CoV-2 IgM testing was restricted to travel protocols. The overall data covered October 26, 2020, through January 29, 2021.
†There were no indeterminate RT-PCR results in the pretravel group. For the overall RT-PCR testing, a total of 9530 (21.7%) patients had either an indeterminate or positive RT-PCR result or both. Indeterminate results at UIHC were always repeated from the beginning to rule out false positives and were reported as “indeterminate” but flagged as positive.
§For the overall RT-PCR testing, 32 070 (39.8%) of 80 678 tests were ordered in asymptomatic patients without known exposure as part of screening protocols such as inpatient admissions, preprocedural, or pretravel. Within this group, 717 (2.2%) of 32 070 were positive and 60 (0.19%) were indeterminate. The remaining 48 608 (60.2%) of 80 678 tests were ordered for patients with symptoms and/or suspected exposure to someone else with infection. Within this group, 8798 (18.1%) of 48 608 were positive and 91 (0.19%) were indeterminate.
Patients Who Tested Positive in Pretravel SARS-CoV-2 Testing.
| Age/Sex | Previous testing results | RT-PCR target cycles | Repeat testing results | ||
|---|---|---|---|---|---|
| Nucleocapsid | ORF1ab | Spike | |||
| 20 Female | NA | 33.6 | 34.6 | 38.9 | NA |
| 23 Male | Positive, 94 days prior* | 28.0 | 28.5 | 29.1 | NA |
| 24 Male | NA | >40 | 33.2 | >40 | NA |
| 27 Female | Positive, 45 days prior* | 34.3 | 35.9 | >40 | NA |
| 30 Male | Negative, 35 days prior | 33.2 | 31.4 | 31.9 | Negative, 1 day after |
| 36 Male | NA | 33.5 | 32.9 | 36.5 | NA |
| 37 Male | NA | 32.5 | 31.9 | 34.3 | NA |
| 40 Male | Positive, 45 days prior* | 32.1 | 32.4 | 33.2 | NA |
| 44 Female | Positive, 24 days prior* | 32.2 | 31.4 | 39.3 | NA |
| 44 Male | NA | 34.5 | 33.9 | >40 | NA |
| 54 Male | NA | 27.9 | 26.3 | 27.0 | NA |
| 68 Male | Positive, 76 days prior* | 32.1 | 32.5 | 32.2 | NA |
| 71 Male | NA | 31.1 | 30.2 | 35.1 | Negative, 1 day after |
Abbreviations: NA, not available; RT-PCR, reverse-transcriptase polymerase chain reaction; SARS-CoV-2, severe acute respiratory syndrome coronavirus-2.
* Pretravel RT-PCR showed higher cycle threshold than the prior positive.
Figure 2.Assay cutoff values for immunoglobulin M (IgM) positive samples. The samples on the left side of the figure are samples that tested positive in assay validation studies. The validation samples are annotated by those that were positive on 2 different IgM assays versus one sample that was collected prior to the pandemic (“pre-COVID”). The samples on the right side of the figure are patient samples from pretravel testing. Patients A, B, and C are discussed in more detail in the article. The criteria for assay positivity are a signal of 1.10 or greater (dashed line).