| Literature DB >> 33995333 |
Andreas Petersen1, Kjersti W Larssen2, Frode W Gran2, Hege Enger2, Sara Hæggman3, Barbro Mäkitalo3, Gunnsteinn Haraldsson4, Laura Lindholm5, Jaana Vuopio5,6,7, Anna Emilie Henius1, Jens Nielsen8, Anders R Larsen1.
Abstract
Methicillin-resistant Staphylococcus aureus (MRSA) is notifiable in Denmark, Finland, Iceland, Norway and Sweden. The prevalence of MRSA in this region has been low for many years, but all five countries experience increasing numbers of new cases. The aim of the study was to describe the molecular epidemiology in the Nordic countries 2009-2016. Numbers of new cases of MRSA from 1997 to 2016 were compared, and a database containing information on spa-type and place of residence or acquisition, for all new MRSA isolates from 2009 to 2016 was established. A website was developed to visualize the geographic distribution of the spa-types. The incidence of new MRSA cases increased in all Nordic countries with Denmark having 61.8 new cases per 100,000 inhabitants in 2016 as the highest. The number of new cases 2009 to 2016 was 60,984. spa-typing revealed a high genetic diversity, with a total of 2,344 different spa-types identified. The majority of these spa-types (N = 2,017) were found in 1-10 cases. The most common spa-types t127/CC1, t223/CC22, and t304/CC6:8 increased significantly in all Nordic countries during the study period, except for Iceland, while spa-type t002/CC5 decreased in the same four countries. The trends of other common spa-types were different in each of the Nordic countries. The Nordic countries were shown to share similar trends but also to have country-specific characteristics in their MRSA populations. A continued increasing numbers of MRSA will challenge the surveillance economically. A more selected molecular surveillance will probably have to be employed in the future.Entities:
Keywords: MRSA; Staphylococcus aureus; epidemiology; spa-typing; surveillance
Year: 2021 PMID: 33995333 PMCID: PMC8119743 DOI: 10.3389/fmicb.2021.668900
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
Health care systems and MRSA policy in the Nordic countries.
| Assigned family doctor | Yes | Yes | No | Yes | Yes |
| Government financed care | Free/substantially sponsored | Free | Substantially sponsored | Free/substantially sponsored§ | Free/substantially sponsored§ |
| Infection notified | Since 2000 | Since 2006 | Since 1995 | Since 1995 | Since 2008 |
| Carriage notified | Since 2000 | Since 2006 | Since 1995 | Since 2005 | Since 2008 |
| MRSA screening | At hospital admission or according to risk factors* | At hospital admission or before work according to risk factors* | At hospital admission or according to risk factors* | At hospital admission or before work according to risk factors* | At hospital admission or according to risk factors* |
| Contact tracing in HCI | Unexpected finding in patient | Unexpected finding in patient | Unexpected finding in patient | Unexpected finding in patient or HCW | Unexpected finding in patient |
| Contact tracing in PC | Household members or in relation to outbreaks | Household members or in relation to outbreaks | Depending on risk factors# | Depending on risk factors# or in relation to outbreaks | Depending on risk factors# or in relation to outbreaks |
| Isolation in hospitals | Single room if available | Contact isolation in single room | Contact precautions | Contact isolation in single room | Contact isolation in single room |
| Isolation in NHs | Standard and contact precautions (patient depending) | Single room with barrier precautions | Contact or standard precaution (unit and patient depending) | Contact or standard precaution (unit and patient depending) | Single room No isolation |
| Work restrictions | Depending on risk factors& | H work allowed if decolonized Relocation considered | H work allowed if decolonized and no skin problems Relocation considered if skin lesions/problems | Clinical work in HCI not allowed | Clinical work in HCI not allowed |
| Decolonization therapy for HCWs | Selected cases | Should be offered | Should be offered | Should be offered | Always |
| Decolonization therapy for others | Selected cases | Offered to carriers and households, except if working with live pigs | Offered to patients, in outbreak situations and all pre- surgery | Offered to patients. Recommendation depends on risk factors | Most patients. Recommendation depends on risk factors |
| Treatment free of charge? | Yes | Infections are subsidized. Carriage is free in 4/5 regions | Infections and carriage are subsidized. HCW paid by employer (hospital) | Infections and carriage | Infections and carriage |
| Follow up of HCWs | Until 3 negative samples in a one-year period. | At day 1, 7, 14, 21 + 6 months. | After decolonization: three controls and if hospitalized at admission | At 1,2 and 3 weeks + 3,6 and 12 months | At 1, 2 and 3 weeks + 3, 6 and 12 months |
| Follow up of other carriers | Until 3 negative samples in a one-year period | Hs: At 1, 2 and 3 weeks + 6 months. PC: At 1 + 6 months | At readmission. After decolonization: three controls | At 1,2 and 3 weeks + 3,6 and 12 months | Depending on risk factors |
FIGURE 1Incidence of notified MRSA cases in the Nordic countries, 1997–2016.
Diversity of spa-types among MRSA in the Nordic countries 2009-2016.
| No of | 890 | 709 | 91 | 904 | 1266 | 2344 |
| No of | 522 (59%) | 409 (58%) | 59 (65%) | 499 (55%) | 689 (54%) | 1248 (53%) |
| No of | 42 (5%) | 35 (5%) | 2 (2%) | 44 (5%) | 70 (6%) | 125 (5%) |
| No of | 332 (37%) | 286 (40%) | 13 (14%) | 321 (36%) | 593 (47%) | NA |
| Simpson’s Diversity Index | 0.95 | 0.93 | 0.94 | 0.97 | 0.97 | 0.97 |
Numbers and trends of the ten most prevalent spa types among MRSA cases in the Nordic countries in 2009–2016. Total denotes total number of MRSA per year and trend of total numbers.
| t223/CC22/TJEJCMOMOKR | 46 | 54 | 76 | 106 | 153 | 232 | 332 | 501 | 1.21 (1.18 – 1.25) | 0.000 |
| t008/CC8/YHGFMBQBLO | 151 | 149 | 168 | 133 | 187 | 187 | 185 | 173 | 0.88 (0.85 – 0.91) | 0.000 |
| t002/CC5/TJMBMDMGMK | 101 | 101 | 169 | 176 | 178 | 173 | 206 | 203 | 0.94 (0.89 – 0.98) | 0.008 |
| t044/CC80/UJGBBPB | 105 | 98 | 92 | 81 | 124 | 179 | 271 | 225 | 0.99 (0.94 – 1.05) | 0.797 |
| t304/CC6:8/YC2FMBQBLO | 11 | 20 | 22 | 46 | 64 | 120 | 234 | 511 | 1.49 (1.40 – 1.59) | 0.000 |
| t127/CC1/UJFKBPE | 44 | 51 | 70 | 68 | 121 | 128 | 233 | 249 | 1.11 (1.07 – 1.15) | 0.000 |
| t019/CC30/XKAKAOMQ | 59 | 65 | 131 | 107 | 93 | 116 | 90 | 100 | 0.89 (0.82 – 0.97) | 0.007 |
| t690/CC88/UGFMEEBBBPB | 10 | 21 | 46 | 38 | 50 | 72 | 110 | 94 | 1.12 (1.03 – 1.21) | 0.005 |
| t437/CC59/ZDMDMOB | 52 | 51 | 49 | 56 | 50 | 69 | 50 | 48 | 0.85 (0.82 – 0.89) | 0.000 |
| t386/CC1/UJE | 4 | 9 | 6 | 16 | 32 | 51 | 95 | 107 | 1.36 (1.26 – 1.48) | 0.000 |
| Total | ||||||||||
| t034/CC398/XKAOAOBQO | 27 | 93 | 130 | 185 | 527 | 972 | (237)a | (118)a | 1.51b (1.40 – 1.63) | 0.000 |
| t002/CC5/TJMBMDMGMK | 88 | 110 | 119 | 141 | 161 | 175 | 172 | 188 | 0.89 (0.87 – 0.92) | 0.000 |
| t008/CC8/YHGFMBQBLO | 90 | 92 | 122 | 130 | 113 | 114 | 122 | 106 | 0.83 (0.79 – 0.86) | 0.000 |
| t019/CC30/XKAKAOMQ | 43 | 73 | 97 | 97 | 92 | 67 | 89 | 96 | 0.86 (0.80 – 0.92) | 0.000 |
| t127/CC1/UJFKBPE | 13 | 33 | 46 | 43 | 87 | 130 | 148 | 135 | 1.10 (1.03 – 1.17) | 0.003 |
| t304/CC6:8/YC2FMBQBLO | 1 | 5 | 37 | 74 | 75 | 76 | 111 | 224 | 1.36 (1.09 – 1.71) | 0.008 |
| t223/CC22/TJEJCMOMOKR | 16 | 17 | 29 | 37 | 47 | 95 | 87 | 212 | 1.18 (1.10 – 1.27) | 0.000 |
| t044/CC80/UJGBBPB | 61 | 36 | 58 | 45 | 47 | 37 | 48 | 84 | 0.84 (0.77 – 0.91) | 0.000 |
| t024/CC8/YGFMBQBLO | 66 | 80 | 68 | 43 | 42 | 44 | 26 | 15 | 0.67 (0.64 – 0.71) | 0.000 |
| t032/CC22/TJJEJNF2MNF2MOMOKR | 24 | 39 | 33 | 88 | 49 | 68 | 41 | 26 | 0.83 (0.72 – 0.95) | 0.008 |
| Total | ||||||||||
| t067/CC5/TJMBMDMGM | 348 | 370 | 382 | 209 | 217 | 141 | 75 | 144 | 0.80 (0.75 – 0.85) | 0.000 |
| t172/CC59/ZDMA3KB | 211 | 189 | 257 | 228 | 233 | 259 | 214 | 188 | 0.98 (0.93 – 1.03) | 0.37 |
| t008/CC8/YHGFMBQBLO | 100 | 120 | 127 | 165 | 143 | 150 | 114 | 219 | 1.04 (1.00 – 1.09) | 0.04 |
| t002/CC5/TJMBMDMGMK | 63 | 55 | 62 | 58 | 39 | 44 | 49 | 60 | 0.95 (0.91 – 0.99) | 0.012 |
| t032/CC22/TJJEJNF2MNF2MOMOKR | 74 | 42 | 39 | 44 | 52 | 43 | 22 | 18 | 0.85 (0.78 – 0.93) | 0.000 |
| t044/CC80/UJGBBPB | 17 | 17 | 14 | 32 | 46 | 38 | 47 | 64 | 1.19 (1.11 – 1.28) | 0.000 |
| t127/CC1/UJFKBPE | 18 | 13 | 24 | 19 | 36 | 26 | 50 | 64 | 1.19 (1.12 – 1.27) | 0.000 |
| t223/CC22/TJEJCMOMOKR | 10 | 37 | 18 | 15 | 21 | 26 | 43 | 77 | 1.17 (1.04 – 1.30) | 0.008 |
| t304/CC6:8/YC2FMBQBLO | 4 | 4 | 17 | 14 | 19 | 11 | 52 | 123 | 1.51 (1.32 – 1.73) | 0.000 |
| t020/CC22/TJNF2MNF2MOMOKR | 33 | 29 | 16 | 22 | 24 | 41 | 26 | 32 | 1.00 (0.92 – 1.08) | 0.945 |
| Total | ||||||||||
| t002/CC5/TJMBMDMGMK | 92 | 100 | 125 | 135 | 154 | 177 | 236 | 221 | 0.97 (0.95 – 1.00) | 0.021 |
| t019/CC30/XKAKAOMQ | 59 | 82 | 135 | 124 | 157 | 151 | 150 | 100 | 0.92 (0.85 – 1.00) | 0.058 |
| t008/CC8/YHGFMBQBLO | 91 | 84 | 100 | 79 | 98 | 121 | 139 | 112 | 0.90 (0.87 – 0.92) | 0.000 |
| t223/CC22/TJEJCMOMOKR | 20 | 41 | 44 | 49 | 78 | 90 | 176 | 232 | 1.18 (1.13 – 1.24) | 0.000 |
| t127/CC1/UJFKBPE | 15 | 37 | 25 | 52 | 63 | 112 | 114 | 168 | 1.16 (1.09 – 1.22) | 0.000 |
| t044/CC80/UJGBBPB | 47 | 53 | 69 | 43 | 26 | 77 | 80 | 85 | 0.91 (0.84 – 0.99) | 0.033 |
| t304/CC6:8/YC2FMBQBLO | 11 | 17 | 31 | 20 | 33 | 51 | 98 | 202 | 1.25 (1.14 – 1.37) | 0.000 |
| t437/CC59/ZDMDMOB | 25 | 21 | 35 | 40 | 44 | 60 | 48 | 80 | 1.00 (0.95 – 1.05) | 0.980 |
| t657/CC97/TJEFMBPB | 5 | 11 | 12 | 9 | 25 | 48 | 35 | 44 | 1.14 (1.03 – 1.27) | 0.012 |
| t688/CC5/TJMBMK | 21 | 28 | 16 | 13 | 31 | 39 | 34 | 0.98 (0.80 – 1.20) | 0.852 | |
| Total | ||||||||||
| t019/CC30/XKAKAOMQ | 1 | 8 | 14 | 8 | 8 | 3 | 11 | 19 | 1.04 (0.89 – 1.20) | 0.628 |
| t008/CC8/YHGFMBQBLO | 5 | 6 | 6 | 4 | 11 | 8 | 8 | 4 | 0.93 (0.80 – 1.07) | 0.296 |
| t002/CC5/TJMBMDMGMK | 3 | 1 | 1 | 3 | 2 | 5 | 5 | |||
| t186/CC88/UGFMEEBBPB | 3 | 1 | 3 | 3 | 5 | 2 | ||||
| t253/CC30/WGKAKAOMQQQQ | 15 | |||||||||
| t437/CC59/ZDMDMOB | 1 | 2 | 10 | 1 | 1 | |||||
| t012/CC30/WGKAKAOMQQ | 3 | 1 | 4 | 1 | 4 | |||||
| t127/CC1/UJFKBPE | 1 | 1 | 3 | 1 | 1 | 5 | ||||
| t1228/NR/TJMGMDMGMK | 12 | |||||||||
| t3364/CC8/YHGFMFBQBLO | 2 | 6 | ||||||||
| Total | ||||||||||
FIGURE 2Geographic distribution of MRSA spa-type t223 in the Nordic countries in the years.2010, 2012, 2014, and 2016.
The ten most prevalent PVL positive MRSA spa types in the Nordic countries 2009-2016 in total and by year.
| t008/CC8/YHGFMBQBLO | 2696/82 | 289 | 296 | 334 | 299 | 381 | 392 | 380 | 325 |
| t019/CC30/XKAKAOMQ | 2408/96 | 164 | 227 | 365 | 341 | 361 | 341 | 319 | 290 |
| t044/CC80/UJGBBPB | 2052/96 | 223 | 190 | 216 | 177 | 200 | 295 | 385 | 366 |
| t002/CC5/TJMBMDMGMK | 1149/31 | 65 | 86 | 121 | 181 | 163 | 157 | 182 | 194 |
| t437/CC59/ZDMDMOB | 794/74 | 63 | 73 | 92 | 84 | 104 | 130 | 109 | 139 |
| t657/CC97/TJEFMBPB | 520/97 | 27 | 45 | 62 | 56 | 59 | 84 | 87 | 100 |
| t690/CC88/UGFMEEBBBPB | 451/63 | 4 | 27 | 48 | 35 | 40 | 74 | 120 | 103 |
| t127/CC1/UJFKBPE | 399/18 | 6 | 9 | 12 | 9 | 59 | 74 | 127 | 103 |
| t852/CC22/UJEJNCMOMOKR | 273/95 | 24 | 19 | 18 | 36 | 42 | 34 | 47 | 53 |
| t021/CC30/WGKAKAOMQ | 272/68 | 6 | 19 | 15 | 19 | 28 | 27 | 63 | 95 |