Literature DB >> 3399383

Erythroid-specific gene chromatin has an altered association with linker histones.

J A Ridsdale1, J B Rattner, J R Davie.   

Abstract

The chromatin of several genes was assayed for sensitivity to DNAase I and for solubility as polynucleosomes in 0.15 M NaCl. The degree of solubility of chromatin fragments as polynucleosomes in 0.15 M NaCl correlates well with the sensitivity to DNAase I for several genes. Chromatin of repressed, housekeeping and erythroid-specific genes can be distinguished as distinct groups by the degree to which they display these properties. NaCl precipitation of chromatin fragments stripped and then reconstituted with varying quantities of H1 and H5 (linker) histones indicate that the polynucleosomes of erythroid-specific genes have altered interaction with these histones. Linker histones interacted with bulk chromatin and in the chromatin of the repressed ovalbumin and vitellogenin genes to form salt precipitable structures. Chromatin of erythroid-specific genes (histone H5 and beta-globin) as well as that of the histone H2A.F gene was resistant to linker histone induced precipitation.

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Year:  1988        PMID: 3399383      PMCID: PMC336837          DOI: 10.1093/nar/16.13.5915

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

1.  The ovalbumin gene: cloning of the natural gene.

Authors:  S L Woo; A Dugaiczyk; M J Tsai; E C Lai; J F Catterall; B W O'Malley
Journal:  Proc Natl Acad Sci U S A       Date:  1978-08       Impact factor: 11.205

2.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

3.  Nucleosomal particles open as the histone core becomes hyperacetylated.

Authors:  J Bode; M M Gómez-Lira; H Schröter
Journal:  Eur J Biochem       Date:  1983-02-15

4.  A 200 base pair region at the 5' end of the chicken adult beta-globin gene is accessible to nuclease digestion.

Authors:  J D McGhee; W I Wood; M Dolan; J D Engel; G Felsenfeld
Journal:  Cell       Date:  1981-11       Impact factor: 41.582

5.  The chicken beta globin gene region. Delineation of transcription units and developmental regulation of interspersed DNA repeats.

Authors:  B Villeponteau; G M Landes; M J Pankratz; H G Martinson
Journal:  J Biol Chem       Date:  1982-09-25       Impact factor: 5.157

6.  Salt induced transitions of chromatin core particles studied by tyrosine fluorescence anisotropy.

Authors:  L J Libertini; E W Small
Journal:  Nucleic Acids Res       Date:  1980-08-25       Impact factor: 16.971

7.  Characterization of the chicken vimentin gene: single copy gene producing multiple mRNAs.

Authors:  Z E Zehner; B M Paterson
Journal:  Proc Natl Acad Sci U S A       Date:  1983-02       Impact factor: 11.205

8.  Position-independent, high-level expression of the human beta-globin gene in transgenic mice.

Authors:  F Grosveld; G B van Assendelft; D R Greaves; G Kollias
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582

9.  Reassociation of histone H1 with nucleosomes.

Authors:  P P Nelson; S C Albright; J M Wiseman; W T Garrard
Journal:  J Biol Chem       Date:  1979-11-25       Impact factor: 5.157

10.  Participation of core histone "tails" in the stabilization of the chromatin solenoid.

Authors:  J Allan; N Harborne; D C Rau; H Gould
Journal:  J Cell Biol       Date:  1982-05       Impact factor: 10.539

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  12 in total

Review 1.  Role of histone acetylation in the assembly and modulation of chromatin structures.

Authors:  A T Annunziato; J C Hansen
Journal:  Gene Expr       Date:  2000

2.  Ultrastructure of transcriptionally competent chromatin.

Authors:  L Locklear; J A Ridsdale; D P Bazett-Jones; J R Davie
Journal:  Nucleic Acids Res       Date:  1990-12-11       Impact factor: 16.971

3.  Nucleosomal histones of transcriptionally active/competent chromatin preferentially exchange with newly synthesized histones in quiescent chicken erythrocytes.

Authors:  M J Hendzel; J R Davie
Journal:  Biochem J       Date:  1990-10-01       Impact factor: 3.857

4.  In situ footprinting of chicken histone H5 gene in mature and immature erythrocytes reveals common factor-binding sites.

Authors:  J M Sun; R Ferraiuolo; J R Davie
Journal:  Chromosoma       Date:  1996-04       Impact factor: 4.316

5.  Chromatin structure of erythroid-specific genes of immature and mature chicken erythrocytes.

Authors:  G P Delcuve; J R Davie
Journal:  Biochem J       Date:  1989-10-01       Impact factor: 3.857

6.  Influence of histone acetylation on the solubility, H1 content and DNase I sensitivity of newly assembled chromatin.

Authors:  C A Perry; A T Annunziato
Journal:  Nucleic Acids Res       Date:  1989-06-12       Impact factor: 16.971

7.  Identification of a replication-independent replacement histone H3 in the basidiomycete Ustilago maydis.

Authors:  Verma Anju; Tamas Kapros; Jakob H Waterborg
Journal:  J Biol Chem       Date:  2011-06-06       Impact factor: 5.157

8.  Distribution of high mobility group proteins 1/2, E and 14/17 and linker histones H1 and H5 on transcribed and non-transcribed regions of chicken erythrocyte chromatin.

Authors:  Y V Postnikov; V V Shick; A V Belyavsky; K R Khrapko; K L Brodolin; T A Nikolskaya; A D Mirzabekov
Journal:  Nucleic Acids Res       Date:  1991-02-25       Impact factor: 16.971

9.  Structure of active chromatin: isolation and characterization of transcriptionally active chromatin from rat liver.

Authors:  K Tikoo; S Gupta; Q A Hamid; V Shah; B Chatterjee; Z Ali
Journal:  Biochem J       Date:  1997-02-15       Impact factor: 3.857

Review 10.  The dynamic broad epigenetic (H3K4me3, H3K27ac) domain as a mark of essential genes.

Authors:  Tasnim H Beacon; Geneviève P Delcuve; Camila López; Gino Nardocci; Igor Kovalchuk; Andre J van Wijnen; James R Davie
Journal:  Clin Epigenetics       Date:  2021-07-08       Impact factor: 6.551

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