Literature DB >> 33993794

Reproducibility of findings in modern PET neuroimaging: insight from the NRM2018 grand challenge.

Mattia Veronese1, Gaia Rizzo2, Martin Belzunce3, Julia Schubert1, Graham Searle2, Alex Whittington2, Ayla Mansur2,4, Joel Dunn3,5, Andrew Reader3, Roger N Gunn2,4.   

Abstract

The reproducibility of findings is a compelling methodological problem that the neuroimaging community is facing these days. The lack of standardized pipelines for image processing, quantification and statistics plays a major role in the variability and interpretation of results, even when the same data are analysed. This problem is well-known in MRI studies, where the indisputable value of the method has been complicated by a number of studies that produce discrepant results. However, any research domain with complex data and flexible analytical procedures can experience a similar lack of reproducibility. In this paper we investigate this issue for brain PET imaging. During the 2018 NeuroReceptor Mapping conference, the brain PET community was challenged with a computational contest involving a simulated neurotransmitter release experiment. Fourteen international teams analysed the same imaging dataset, for which the ground-truth was known. Despite a plurality of methods, the solutions were consistent across participants, although not identical. These results should create awareness that the increased sharing of PET data alone will only be one component of enhancing confidence in neuroimaging results and that it will be important to complement this with full details of the analysis pipelines and procedures that have been used to quantify data.

Entities:  

Keywords:  PET; data analysis; data sharing; reproducibility crisis; “NRM2018 PET Grand Challenge”

Year:  2021        PMID: 33993794     DOI: 10.1177/0271678X211015101

Source DB:  PubMed          Journal:  J Cereb Blood Flow Metab        ISSN: 0271-678X            Impact factor:   6.200


  2 in total

1.  PET-BIDS, an extension to the brain imaging data structure for positron emission tomography.

Authors:  Martin Norgaard; Granville J Matheson; Hanne D Hansen; Adam Thomas; Graham Searle; Gaia Rizzo; Mattia Veronese; Alessio Giacomel; Maqsood Yaqub; Matteo Tonietto; Thomas Funck; Ashley Gillman; Hugo Boniface; Alexandre Routier; Jelle R Dalenberg; Tobey Betthauser; Franklin Feingold; Christopher J Markiewicz; Krzysztof J Gorgolewski; Ross W Blair; Stefan Appelhoff; Remi Gau; Taylor Salo; Guiomar Niso; Cyril Pernet; Christophe Phillips; Robert Oostenveld; Jean-Dominique Gallezot; Richard E Carson; Gitte M Knudsen; Robert B Innis; Melanie Ganz
Journal:  Sci Data       Date:  2022-03-02       Impact factor: 6.444

2.  In Vivo Cerebral Translocator Protein (TSPO) Binding and Its Relationship with Blood Adiponectin Levels in Treatment-Naïve Young Adults with Major Depression: A [11C]PK11195 PET Study.

Authors:  Yo-Han Joo; Min-Woo Lee; Young-Don Son; Keun-A Chang; Maqsood Yaqub; Hang-Keun Kim; Paul Cumming; Jong-Hoon Kim
Journal:  Biomedicines       Date:  2021-12-24
  2 in total

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