Literature DB >> 33993015

Hybrid dilation and attention residual U-Net for medical image segmentation.

Zekun Wang1, Yanni Zou2, Peter X Liu3.   

Abstract

Medical image segmentation is a typical task in medical image processing and critical foundation in medical image analysis. U-Net is well-liked in medical image segmentation, but it doesn't fully explore useful features of the channel and capitalize on the contextual information. Therefore, we present an improved U-Net with residual connections, adding a plug-and-play, very portable channel attention (CA) block and a hybrid dilated attention convolutional (HDAC) layer to perform medical image segmentation for different tasks accurately and effectively, and call it HDA-ResUNet, in which we fully utilize advantages of U-Net, attention mechanism and dilated convolution. In contrast to the simple copy splicing of U-Net in the skip connection, the channel attention block is inserted into the extracted feature map of the encoding path before decoding operation. Since this block is lightweight, we can apply it to multiple layers in the backbone network to optimize the channel effect of this layer's coding operation. In addition, the convolutional layer at the bottom of the "U"-shaped network is replaced by a hybrid dilated attention convolutional (HDAC) layer to fuse information from different sizes of receptive fields. The proposed HDA-ResUNet is evaluated on four datasets: liver and tumor segmentation (LiTS 2017), lung segmentation (Lung dataset), nuclear segmentation in microscope images (DSB 2018) and neuron structure segmentation (ISBI 2012). The dice global scores of liver and tumor segmentation (LiTS 2017) reach 0.949 and 0.799. The dice coefficients of lung segmentation and nuclear segmentation are 0.9797 and 0.9081 respectively, and the information theoretic score for the last one is 0.9703. The segmentation results are all more accurate than U-Net with fewer parameters, and the problem of slow convergence speed of U-Net on DBS 2018 is solved.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Channel attention mechanism; Convolutional neural network; Deep learning; Dilated convolution; Medical image segmentation

Year:  2021        PMID: 33993015     DOI: 10.1016/j.compbiomed.2021.104449

Source DB:  PubMed          Journal:  Comput Biol Med        ISSN: 0010-4825            Impact factor:   4.589


  6 in total

1.  APU-Net: An Attention Mechanism Parallel U-Net for Lung Tumor Segmentation.

Authors:  Tao Zhou; YaLi Dong; HuiLing Lu; XiaoMin Zheng; Shi Qiu; SenBao Hou
Journal:  Biomed Res Int       Date:  2022-05-09       Impact factor: 3.246

2.  Intelligent localization and quantitative evaluation of anterior talofibular ligament injury using magnetic resonance imaging of ankle.

Authors:  Wen Yan; Xianghong Meng; Jinglai Sun; Hui Yu; Zhi Wang
Journal:  BMC Med Imaging       Date:  2021-08-28       Impact factor: 1.930

3.  AAWS-Net: Anatomy-aware weakly-supervised learning network for breast mass segmentation.

Authors:  Yeheng Sun; Yule Ji
Journal:  PLoS One       Date:  2021-08-30       Impact factor: 3.240

4.  PIxel-Level Segmentation of Bladder Tumors on MR Images Using a Random Forest Classifier.

Authors:  Ziqi Li; Na Feng; Huangsheng Pu; Qi Dong; Yan Liu; Yang Liu; Xiaopan Xu
Journal:  Technol Cancer Res Treat       Date:  2022 Jan-Dec

Review 5.  Research on CT Lung Segmentation Method of Preschool Children based on Traditional Image Processing and ResUnet.

Authors:  Zheming Li; Li Yang; Liqi Shu; Zhuo Yu; Jian Huang; Jing Li; Lingdong Chen; Shasha Hu; Ting Shu; Gang Yu
Journal:  Comput Math Methods Med       Date:  2022-10-10       Impact factor: 2.809

Review 6.  Towards Machine Learning-Aided Lung Cancer Clinical Routines: Approaches and Open Challenges.

Authors:  Francisco Silva; Tania Pereira; Inês Neves; Joana Morgado; Cláudia Freitas; Mafalda Malafaia; Joana Sousa; João Fonseca; Eduardo Negrão; Beatriz Flor de Lima; Miguel Correia da Silva; António J Madureira; Isabel Ramos; José Luis Costa; Venceslau Hespanhol; António Cunha; Hélder P Oliveira
Journal:  J Pers Med       Date:  2022-03-16
  6 in total

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