Literature DB >> 33990905

In vivo Engineering of Chromosome 19 q-arm by Employing the CRISPR/AsCpf1 and ddAsCpf1 Systems in Human Malignant Gliomas (Hypothesis).

Atefe Abak1, Hamed Shoorei2, Mohammad Taheri3, Soudeh Ghafouri-Fard4.   

Abstract

Deletions of the q13.3 region of chromosome 19 have been found commonly in all three main kinds of diffuse human malignant gliomas, powerfully demonstrating the existence of tumor suppressor genes in this region. Consistent with the previous studies, the most common deletion interval has been mapped to a roughly 4 Mb region of 19q13.3 between the APOC2 and HRC genes, between genetic markers D19S219 and D19S246. EML2 is a tumor suppressor gene that is located on 19q13.32 and is considerably methylated in high-grade gliomas. Notably, MIR330 gene that is situated within the non-coding intronic region of EML2 is also detected as an oncosuppressor-miR in a variety of cancers including gliomas. Additionally, glioma oncoprotein Bcl2L12 which is located on 19q13.33 is significantly overexpressed in glioblastoma multiform and has a pivotal role in cancer evolution and resistance to apoptosis. Other genes such as MIR519D and NOP53 are also discovered as tumor suppressor genes in gliomas which are located on 19q13.3 and 19q13.4, respectively. Therefore, we hypothesize that a CRISPR/AsCpf1-based genome engineering strategy might be utilized to attach these deleted sizeable chromosomal portions of genes coding tumor suppressors as vital parts of the chromosome 19 q-arm with the purpose of treatment of this chromosomal abnormality in gliomas. Also, we can concurrently employ the CRISPR-ddAsCpf1 strategy for the precise suppression of Bcl2L12 oncogene in glioma.
© 2021. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Bcl2L12; CRISPR/AsCpf1; CRISPR/ddAsCpf1; EML2; Human gliomas; MIR519D; NOP53

Mesh:

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Year:  2021        PMID: 33990905     DOI: 10.1007/s12031-021-01855-1

Source DB:  PubMed          Journal:  J Mol Neurosci        ISSN: 0895-8696            Impact factor:   3.444


  52 in total

1.  The CRISPR-associated DNA-cleaving enzyme Cpf1 also processes precursor CRISPR RNA.

Authors:  Ines Fonfara; Hagen Richter; Majda Bratovič; Anaïs Le Rhun; Emmanuelle Charpentier
Journal:  Nature       Date:  2016-04-20       Impact factor: 49.962

2.  The crystal structure of Cpf1 in complex with CRISPR RNA.

Authors:  De Dong; Kuan Ren; Xiaolin Qiu; Jianlin Zheng; Minghui Guo; Xiaoyu Guan; Hongnan Liu; Ningning Li; Bailing Zhang; Daijun Yang; Chuang Ma; Shuo Wang; Dan Wu; Yunfeng Ma; Shilong Fan; Jiawei Wang; Ning Gao; Zhiwei Huang
Journal:  Nature       Date:  2016-04-20       Impact factor: 49.962

3.  Loss of heterozygosity in human ovarian cancer on chromosome 19q.

Authors:  A Bicher; K Ault; A Kimmelman; D Gershenson; E Reed; B Liang
Journal:  Gynecol Oncol       Date:  1997-07       Impact factor: 5.482

4.  Quantitative, genome-wide analysis of the DNA methylome in sporadic pituitary adenomas.

Authors:  Cuong V Duong; Richard D Emes; Frank Wessely; Kiren Yacqub-Usman; Richard N Clayton; William E Farrell
Journal:  Endocr Relat Cancer       Date:  2012-11-19       Impact factor: 5.678

Review 5.  Malignant astrocytic glioma: genetics, biology, and paths to treatment.

Authors:  Frank B Furnari; Tim Fenton; Robert M Bachoo; Akitake Mukasa; Jayne M Stommel; Alexander Stegh; William C Hahn; Keith L Ligon; David N Louis; Cameron Brennan; Lynda Chin; Ronald A DePinho; Webster K Cavenee
Journal:  Genes Dev       Date:  2007-11-01       Impact factor: 11.361

6.  Frequent deletion of chromosome 19 and a rare rearrangement of 19p13.3 involving the insulin receptor gene in human ovarian cancer.

Authors:  K Amfo; B Neyns; E Teugels; W Lissens; C Bourgain; P De Sutter; B Vandamme; E Vamos; J De Grève
Journal:  Oncogene       Date:  1995-07-20       Impact factor: 9.867

7.  Systemic scAAV9 variant mediates brain transduction in newborn rhesus macaques.

Authors:  Benjamin Dehay; Deniz Dalkara; Sandra Dovero; Qin Li; Erwan Bezard
Journal:  Sci Rep       Date:  2012-02-09       Impact factor: 4.379

8.  The Eukaryotic Promoter Database: expansion of EPDnew and new promoter analysis tools.

Authors:  René Dreos; Giovanna Ambrosini; Rouayda Cavin Périer; Philipp Bucher
Journal:  Nucleic Acids Res       Date:  2014-11-06       Impact factor: 19.160

9.  AAV-mediated direct in vivo CRISPR screen identifies functional suppressors in glioblastoma.

Authors:  Ryan D Chow; Christopher D Guzman; Guangchuan Wang; Florian Schmidt; Mark W Youngblood; Lupeng Ye; Youssef Errami; Matthew B Dong; Michael A Martinez; Sensen Zhang; Paul Renauer; Kaya Bilguvar; Murat Gunel; Phillip A Sharp; Feng Zhang; Randall J Platt; Sidi Chen
Journal:  Nat Neurosci       Date:  2017-08-14       Impact factor: 24.884

10.  GSK3β‑mediated Ser156 phosphorylation modulates a BH3‑like domain in BCL2L12 during TMZ‑induced apoptosis and autophagy in glioma cells.

Authors:  Cheng-Wei Chu; Ming-Chang Yang; Chia-Hua Chou; Wen-Sheng Huang; Bo-Xiu Hsiao; Yeng-Tseng Wang; Shean-Jaw Chiou; Joon-Khim Loh; Yi-Ren Hong
Journal:  Int J Mol Med       Date:  2018-05-11       Impact factor: 4.101

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  1 in total

1.  CRISPR/Cas9-Mediated Disruption of ZNF543 Gene: An Approach Toward Discovering Its Relation to TRIM28 Gene in Parkinson's Disease.

Authors:  Mohammad Hashemabadi; Hosseinali Sasan; Mojdeh Amandadi; Keyvan Esmaeilzadeh-Salestani; Saeed Esmaeili-Mahani; Hadi Ravan
Journal:  Mol Biotechnol       Date:  2022-04-25       Impact factor: 2.695

  1 in total

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