| Literature DB >> 33982673 |
Jiafeng Wang1, Yulan Zhou2, Yixia Yang2, Xiang Gao1, Zhibin Liu1, Guanhao Hong1, Lifen Yao3, Jingwen Yin4, Xuefeng Gu5, Keshen Li6,7,8.
Abstract
To examine the role of S100B in genetic susceptibility to Alzheimer's disease (AD), we conducted a case-control study to analyze four polymorphism loci (rs2839364, rs1051169, rs2300403, and rs9722) of the S100B gene and AD risk. We found an independent increased risk of AD in ApoE ε4(-) subjects carrying the rs9722 AA-genotype (OR = 2.622, 95% CI = 1.399-4.915, P = 0.003). Further investigation revealed the serum S100B levels to be lower in rs9722 GG carriers than in rs9722 AA carriers (P = 0.003). We identified three miRNAs (miR-340-3p, miR-593-3p, miR-6827-3p) in which the seed match region covered locus rs9722. Luciferase assays indicated that the rs9722 G allele has a higher binding affinity to miR-6827-3p than the rs9722 A allele, leading to a significantly decreased fluorescence intensity. Subsequent western blot analysis showed that the S100B protein level of SH-SY5Y cells, which carry the rs9722 G allele, decreased significantly following miR-6827-3p stimulation (P = 0.009). The present study suggests that the rs9722 polymorphism may upregulate the expression of S100B by altering the miRNA binding capacity and may thus increase the AD risk. This finding would be of great help for the early diagnosis of AD.Entities:
Keywords: Alzheimer’s disease; S100B; SNP; miRNA; regulation
Mesh:
Substances:
Year: 2021 PMID: 33982673 PMCID: PMC8202836 DOI: 10.18632/aging.203005
Source DB: PubMed Journal: Aging (Albany NY) ISSN: 1945-4589 Impact factor: 5.682
Figure 1Position distribution of the SNPs in the S100B gene.
Genotype and allele frequency distributions of the S100B SNPs in the AD patients and healthy controls.
| rs2839364 | CC | 283 | 291 | |||||||
| CT | 91 | 90 | 0.865 | 1.040 (0.745–1.451) | C | 657 | 672 | |||
| TT | 25 | 19 | 0.352 | 1.353 (0.729–2.513) | T | 141 | 128 | 0.385 | 1.126 (0.867–1.464) | |
| ApoE ɛ4(−) | CC | 175 | 235 | |||||||
| CT | 59 | 77 | 0.920 | 1.029 (0.695–1.522) | C | 409 | 547 | |||
| TT | 20 | 13 | 0.067 | 2.066 (1.055–4.273) | T | 99 | 103 | 0.119 | 1.285 (0.949–1.742) | |
| ApoE ɛ4(+) | CC | 108 | 56 | |||||||
| CT | 32 | 13 | 0.593 | 1.277 (0.621–2.625) | C | 248 | 125 | |||
| TT | 5 | 6 | 0.200 | 0.432 (0.126–1.477) | T | 42 | 25 | 0.577 | 0.847 (0.494–1.453) | |
| rs1051169 | GG | 166 | 179 | |||||||
| GC | 158 | 168 | 0.938 | 1.021 (0.754–1.381) | G | 490 | 526 | |||
| CC | 75 | 53 | 0.049 | 1.526 (1.012–2.300) | C | 313 | 274 | 0.063 | 1.215 (0.992–1.489) | |
| ApoE ɛ4(−) | GG | 97 | 144 | |||||||
| GC | 104 | 139 | 0.581 | 1.111 (0.774–1.595) | G | 298 | 427 | |||
| CC | 42 | 42 | 0.126 | 1.485 (0.901–2.446) | C | 188 | 223 | 0.135 | 1.208 (0.946–1.542) | |
| ApoE ɛ4(+) | GG | 69 | 35 | |||||||
| GC | 54 | 29 | 0.878 | 0.945 (0.515–1.734) | G | 192 | 99 | |||
| CC | 33 | 11 | 0.336 | 1.522 (0.688–3.368) | C | 126 | 51 | 0.262 | 1.274 (0.849–1.911) | |
| rs2300403 | AA | 189 | 194 | |||||||
| AG | 156 | 168 | 0.764 | 0.953 (0.709–1.282) | A | 534 | 556 | |||
| GG | 52 | 37 | 0.128 | 1.443 (0.905–2.299) | G | 260 | 242 | 0.306 | 1.119 (0.905–1.383) | |
| ApoE ɛ4(−) | AA | 115 | 157 | |||||||
| AG | 98 | 144 | 0.720 | 0.929 (0.654–0.321) | A | 328 | 458 | |||
| GG | 30 | 24 | 0.099 | 1.706 (0.948–3.077) | G | 158 | 192 | 0.299 | 1.149 (0.891–1.481) | |
| ApoE ɛ4(+) | AA | 74 | 37 | |||||||
| AG | 58 | 24 | 0.639 | 1.208 (0.651–2.242) | A | 206 | 98 | |||
| GG | 22 | 13 | 0.687 | 0.846 (0.384–1.866) | G | 102 | 50 | 0.916 | 0.971 (0.641–1.471) | |
| rs9722 | GG | 182 | 209 | |||||||
| GA | 165 | 161 | 0.294 | 1.177 (0.877–1.580) | G | 529 | 579 | |||
| AA | 53 | 30 | A | 271 | 221 | |||||
| ApoE ɛ4(−) | GG | 111 | 169 | |||||||
| GA | 94 | 138 | 0.857 | 1.037 (0.727–1.479) | G | 316 | 468 | |||
| AA | 31 | 18 | A | 156 | 166 | |||||
| ApoE ɛ4(+) | GG | 71 | 40 | |||||||
| GA | 71 | 41 | 0.929 | 0.976 (0.565–1.684) | G | 213 | 121 | |||
| AA | 22 | 12 | 0.937 | 1.033 (0.463–2.306) | A | 93 | 65 | 0.320 | 0.813 (0.552–1.198) |
P values under 0.0167 were indicated in bold font.
Haplotype frequencies of the S100B SNPs in the AD patients and controls.
| C-G-A-G | 485.31 (0.607) | 421.79 (0.527) | 1 | − |
| C-C-A-G | 121.94 (0.152) | 125.88 (0.157) | 0.251 | 1.188 (0.896–1.1.572) |
| C-C-G-A | 91.02 (0.114) | 127.36 (0.159) | 1.605 (1.189–2.165) | |
| C-G-G-A | 89.14 (0.111) | 75.31 (0.094) | 0.865 | 0.968 (0.693–1.351) |
Haplotypes consisted of S100B SNPs rs2839364, rs1051169, rs2300403 and rs9722.
Figure 2Serum S100B levels among different groups. (A) Serum S100B levels between the AD patients and the controls. (B) Serum S100B levels among different genotypes in the AD patients (*P < 0.05).
Figure 3Verification of the interaction between candidate miRNAs and the 3′-UTR of the (A) The candidate miRNAs that can bind to the rs9722 locus in the 3′-UTR of the S100B gene. The red letters show the rs9722 locus. (B) Plasmids containing different genotypes and artificial mutations. The black frame indicates the rs9722 locus. (C) Detection of miRNA levels in the 293T cells after transfection. (D) Fluorescence intensity after transfection of the miRNAs and the plasmids containing the different rs9722 alleles or mutations (*P < 0.05).
Figure 4Western blot analysis of the S100B levels in SH-SY5Y cells after transfection of the three different miRNAs. (A) We detected the S100B protein level using western blot analysis. (B) Densitometry analysis to determine the ratio of S100B to GAPDH. All data are the average of three measurements (*P < 0.05).