| Literature DB >> 33981294 |
Xiao-Qing Zhu1,2, Yi-Yun Liu1,2, Renjie Wu1,2, Haoliang Xun1,2, Jian Sun1,2, Jian Li3, Yaoyu Feng2,4, Jian-Hua Liu1,2.
Abstract
Plasmid-mediated colistin resistance gene mcr-1 generally confers low-level resistance. The purpose of this study was to investigate the impact of mcr-1 on the development of high-level colistin resistance (HLCR) in Klebsiella pneumoniae and Escherichia coli. In this study, mcr-1-negative K. pneumoniae and E. coli strains and their corresponding mcr-1-positive transformants were used to generate HLCR mutants via multiple passages in the presence of increasing concentrations of colistin. We found that for K. pneumoniae, HLCR mutants with minimum inhibitory concentrations (MICs) of colistin from 64 to 1,024 mg/L were generated. Colistin MICs increased 256- to 4,096-fold for mcr-1-negative K. pneumoniae strains but only 16- to 256-fold for the mcr-1-harboring transformants. For E. coli, colistin MICs increased 4- to 64-folds, but only 2- to 16-fold for their mcr-1-harboring transformants. Notably, mcr-1 improved the survival rates of both E. coli and K. pneumoniae strains when challenged with relatively high concentrations of colistin. In HLCR K. pneumoniae mutants, amino acid alterations predominately occurred in crrB, followed by phoQ, crrA, pmrB, mgrB, and phoP, while in E. coli mutants, genetic alterations were mostly occurred in pmrB and phoQ. Additionally, growth rate analyses showed that the coexistence of mcr-1 and chromosomal mutations imposed a fitness burden on HLCR mutants of K. pneumoniae. In conclusion, HLCR was more likely to occur in K. pneumoniae strains than E. coli strains when exposed to colistin. The mcr-1 gene could improve the survival rates of strains of both bacterial species but could not facilitate the evolution of high-level colistin resistance.Entities:
Keywords: Enterobacterales; colistin; fitness cost; mcr-1; resistance
Year: 2021 PMID: 33981294 PMCID: PMC8108134 DOI: 10.3389/fmicb.2021.666782
Source DB: PubMed Journal: Front Microbiol ISSN: 1664-302X Impact factor: 5.640
FIGURE 1Survival curves of E. coli (A–C) and K. pneumoniae strains (D–F) and their mcr-1-positive transformants in the presence of increasing concentrations of colistin.
FIGURE 2Distributions of colistin minimum inhibitory concentration (MIC) values among E. coli and K. pneumoniae mutants after induction of colistin resistance in vitro. (A) Data for 90 mcr-1-positive and 60 mcr-1-negative E. coli derivatives. (B) Data for 81 mcr-1-positive and 75 mcr-1-negative K. pneumoniae derivatives. E. coli data are indicated in blue, and K. pneumoniae data are indicated in orange.
FIGURE 3Occurrence of genetic alterations in mgrB, pmrAB, phoPQ, and crrAB in K. pneumoniae. (A) Distribution of mutations in different genes in 81 mcr-1-positive and 75 mcr-1-negative K. pneumoniae derivatives. (B) Profiles of genetic alterations in key genes related to colistin resistance, with 53 unique combinations in the 156 colistin-resistant K. pneumoniae derivatives. Each unique mutation in each colistin resistance gene is represented by a different color. Specific information on the mutations can be found in Supplementary Table 4.
Number of K. pneumoniae derivatives with genomic mutation(s) in colistin resistance genes after stepwise induction.
| Genome alterations on single gene | Genetic alterations | No. of strains | No. of | No. of |
| Insertional inactivation by ISs | 9 | 6 | 3 | |
| FMs | 2 | 2 | 0 | |
| FMs | 5 | 0 | 5 | |
| Amino acid substitutions | 3 | 0 | 3 | |
| Amino acid substitutions | 3 | 0 | 3 | |
| FMs | 3 | 0 | 3 | |
| Amino acid substitutions | 33 | 27 | 6 | |
| Amino acid substitutions | 9 | 0 | 9 | |
| FMs | 8 | 0 | 8 | |
| Amino acid substitutions | 21 | 6 | 15 | |
| Amino acid substitution, FM | 1 | 0 | 1 | |
| FM | 1 | 0 | 1 | |
| Insertional inactivation by ISs, amino acid substitutions | 3 | 0 | 3 | |
| Total strains with mutations in single gene | 64.7% (101) | 54.7% (41/75) | 74.1% (60/81) | |
| Genome alterations on two or three genes | 5 | 3 | 2 | |
| 9 | 9 | 0 | ||
| 3 | 3 | 0 | ||
| 6 | 6 | 0 | ||
| 6 | 6 | 0 | ||
| 1 | 1 | 0 | ||
| 3 | 0 | 3 | ||
| 1 | 0 | 1 | ||
| 1 | 0 | 1 | ||
| 1 | 0 | 1 | ||
| 1 | 0 | 1 | ||
| 3 | 0 | 3 | ||
| 6 | 3 | 3 | ||
| 3 | 3 | 0 | ||
| 6 | 0 | 6 | ||
| Total strains associate with mutations in two or more genes | 35.3% (55/156) | 45.3% (34/75) | 25.9% (21/81) | |
FIGURE 4Relative growth rates of mcr-1-negative (A) and mcr-1-positive (B) K. pneumoniae mutants and their parental strains. The maximal growth rates are presented as relative values compared with the wild-type growth rate (set to 1.0). The relevant mutated genes of each strain are indicated below the chart. ∗p < 0.05; ∗∗p < 0.01; ∗∗∗p < 0.001. Error bars represent standard deviation values. WT, wild-type; FM, frameshift mutation.