Literature DB >> 33981031

The rumen microbiome: balancing food security and environmental impacts.

Itzhak Mizrahi1, R John Wallace2, Sarah Moraïs3.   

Abstract

Ruminants produce edible products and contribute to food security. They house a complex rumen microbial community that enables the host to digest their plant feed through microbial-mediated fermentation. However, the rumen microbiome is also responsible for the production of one of the most potent greenhouse gases, methane, and contributes about 18% of its total anthropogenic emissions. Conventional methods to lower methane production by ruminants have proved successful, but to a limited and often temporary extent. An increased understanding of the host-microbiome interactions has led to the development of new mitigation strategies. In this Review we describe the composition, ecology and metabolism of the rumen microbiome, and the impact on host physiology and the environment. We also discuss the most pertinent methane mitigation strategies that emerged to balance food security and environmental impacts.

Entities:  

Year:  2021        PMID: 33981031     DOI: 10.1038/s41579-021-00543-6

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  139 in total

1.  Diet-induced changes of redox potential underlie compositional shifts in the rumen archaeal community.

Authors:  Nir Friedman; Eran Shriker; Ben Gold; Thomer Durman; Raphy Zarecki; Eytan Ruppin; Itzhak Mizrahi
Journal:  Environ Microbiol       Date:  2016-12-12       Impact factor: 5.491

2.  Microbiome niche modification drives diurnal rumen community assembly, overpowering individual variability and diet effects.

Authors:  Yoav Shaani; Tamar Zehavi; Stav Eyal; Joshuah Miron; Itzhak Mizrahi
Journal:  ISME J       Date:  2018-06-19       Impact factor: 10.302

Review 3.  Review: The compositional variation of the rumen microbiome and its effect on host performance and methane emission.

Authors:  I Mizrahi; E Jami
Journal:  Animal       Date:  2018-08-24       Impact factor: 3.240

4.  Convergent adaptation of human lactase persistence in Africa and Europe.

Authors:  Sarah A Tishkoff; Floyd A Reed; Alessia Ranciaro; Benjamin F Voight; Courtney C Babbitt; Jesse S Silverman; Kweli Powell; Holly M Mortensen; Jibril B Hirbo; Maha Osman; Muntaser Ibrahim; Sabah A Omar; Godfrey Lema; Thomas B Nyambo; Jilur Ghori; Suzannah Bumpstead; Jonathan K Pritchard; Gregory A Wray; Panos Deloukas
Journal:  Nat Genet       Date:  2006-12-10       Impact factor: 38.330

5.  Land, irrigation water, greenhouse gas, and reactive nitrogen burdens of meat, eggs, and dairy production in the United States.

Authors:  Gidon Eshel; Alon Shepon; Tamar Makov; Ron Milo
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

6.  Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants.

Authors:  Sheerli Kruger Ben Shabat; Goor Sasson; Adi Doron-Faigenboim; Thomer Durman; Shamay Yaacoby; Margret E Berg Miller; Bryan A White; Naama Shterzer; Itzhak Mizrahi
Journal:  ISME J       Date:  2016-05-06       Impact factor: 10.302

Review 7.  Addressing Global Ruminant Agricultural Challenges Through Understanding the Rumen Microbiome: Past, Present, and Future.

Authors:  Sharon A Huws; Christopher J Creevey; Linda B Oyama; Itzhak Mizrahi; Stuart E Denman; Milka Popova; Rafael Muñoz-Tamayo; Evelyne Forano; Sinead M Waters; Matthias Hess; Ilma Tapio; Hauke Smidt; Sophie J Krizsan; David R Yáñez-Ruiz; Alejandro Belanche; Leluo Guan; Robert J Gruninger; Tim A McAllister; C Jamie Newbold; Rainer Roehe; Richard J Dewhurst; Tim J Snelling; Mick Watson; Garret Suen; Elizabeth H Hart; Alison H Kingston-Smith; Nigel D Scollan; Rodolpho M do Prado; Eduardo J Pilau; Hilario C Mantovani; Graeme T Attwood; Joan E Edwards; Neil R McEwan; Steven Morrisson; Olga L Mayorga; Christopher Elliott; Diego P Morgavi
Journal:  Front Microbiol       Date:  2018-09-25       Impact factor: 5.640

8.  Ruminal microbiome-host crosstalk stimulates the development of the ruminal epithelium in a lamb model.

Authors:  Limei Lin; Fei Xie; Daming Sun; Junhua Liu; Weiyun Zhu; Shengyong Mao
Journal:  Microbiome       Date:  2019-06-03       Impact factor: 14.650

9.  Regulation of rumen development in neonatal ruminants through microbial metagenomes and host transcriptomes.

Authors:  Nilusha Malmuthuge; Guanxiang Liang; Le Luo Guan
Journal:  Genome Biol       Date:  2019-08-23       Impact factor: 13.583

Review 10.  Worlds within worlds: evolution of the vertebrate gut microbiota.

Authors:  Ruth E Ley; Catherine A Lozupone; Micah Hamady; Rob Knight; Jeffrey I Gordon
Journal:  Nat Rev Microbiol       Date:  2008-10       Impact factor: 60.633

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  15 in total

1.  Functional and phylogenetic analyses of camel rumen microbiota associated with different lignocellulosic substrates.

Authors:  Javad Gharechahi; Sajjad Sarikhan; Jian-Lin Han; Xue-Zhi Ding; Ghasem Hosseini Salekdeh
Journal:  NPJ Biofilms Microbiomes       Date:  2022-06-08       Impact factor: 8.462

2.  FI: The Fecobiome Initiative.

Authors:  Panagiotis Sapountzis; Serafino Teseo; Saria Otani; Frank Møller Aarestrup; Evelyne Forano; Garett Suen; George Tsiamis; Bradd Haley; Jo Ann Van Kessel; Sharon A Huws
Journal:  Foodborne Pathog Dis       Date:  2021-12-21       Impact factor: 3.788

3.  Effects of Dietary Barley Starch Contents on the Performance, Nutrient Digestion, Rumen Fermentation, and Bacterial Community of Fattening Hu Sheep.

Authors:  Xiaowen Ma; Wenjing Zhou; Tongqing Guo; Fei Li; Fadi Li; Tao Ran; Zhian Zhang; Long Guo
Journal:  Front Nutr       Date:  2022-01-27

4.  Integrated meta-omics reveals new ruminal microbial features associated with feed efficiency in dairy cattle.

Authors:  Ming-Yuan Xue; Yun-Yi Xie; Yifan Zhong; Xiao-Jiao Ma; Hui-Zeng Sun; Jian-Xin Liu
Journal:  Microbiome       Date:  2022-02-16       Impact factor: 14.650

Review 5.  Hydrogen and formate production and utilisation in the rumen and the human colon.

Authors:  William J Kelly; Roderick I Mackie; Graeme T Attwood; Peter H Janssen; Tim A McAllister; Sinead C Leahy
Journal:  Anim Microbiome       Date:  2022-03-14

6.  Enhancing Metabolic Efficiency through Optimizing Metabolizable Protein Profile in a Time Progressive Manner with Weaned Goats as a Model: Involvement of Gut Microbiota.

Authors:  Jian Wu; Xiaoli Zhang; Min Wang; Chuanshe Zhou; Jinzhen Jiao; Zhiliang Tan
Journal:  Microbiol Spectr       Date:  2022-04-13

7.  Enteric methane mitigation interventions.

Authors:  Julia Q Fouts; Mallory C Honan; Breanna M Roque; Juan M Tricarico; Ermias Kebreab
Journal:  Transl Anim Sci       Date:  2022-04-08

8.  Anaerobic Fungi Isolated From Bactrian Camel Rumen Contents Have Strong Lignocellulosic Bioconversion Potential.

Authors:  Yihan Xue; Rui Shen; Yuqi Li; Zhanying Sun; Xiaoni Sun; Fengming Li; Xiaobin Li; Yanfen Cheng; Weiyun Zhu
Journal:  Front Microbiol       Date:  2022-07-19       Impact factor: 6.064

9.  Effect of Zanthoxylum bungeanum essential oil on rumen enzyme activity, microbiome, and metabolites in lambs.

Authors:  Hailong Zhang; Xia Lang; Xiao Li; Guoshun Chen; Cailian Wang
Journal:  PLoS One       Date:  2022-08-05       Impact factor: 3.752

10.  Altering Dietary Soluble Protein Levels With Decreasing Crude Protein May Be a Potential Strategy to Improve Nitrogen Efficiency in Hu Sheep Based on Rumen Microbiome and Metabolomics.

Authors:  Zhenbin Zhang; Khuram Shahzad; Sijun Shen; Rong Dai; Yue Lu; Zhiqi Lu; Chuang Li; Yifei Chen; Ruxin Qi; Pengfei Gao; Qingyong Yang; Mengzhi Wang
Journal:  Front Nutr       Date:  2022-01-18
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