Literature DB >> 33972806

Analysis and Classification of Hepatitis Infections Using Raman Spectroscopy and Multiscale Convolutional Neural Networks.

Y Zhao1, Sh Tian1, L Yu2, Zh Zhang3, W Zhang1.   

Abstract

Hepatitis infections represent a major health concern worldwide. Numerous computer-aided approaches have been devised for the early detection of hepatitis. In this study, we propose a method for the analysis and classification of cases of hepatitis-B virus ( HBV), hepatitis-C virus (HCV), and healthy subjects using Raman spectroscopy and a multiscale convolutional neural network (MSCNN). In particular, serum samples of HBV-infected patients (435 cases), HCV-infected patients (374 cases), and healthy persons (499 cases) are analyzed via Raman spectroscopy. The differences between Raman peaks in the measured serum spectra indicate specific biomolecular differences among the three classes. The dimensionality of the spectral data is reduced through principal component analysis. Subsequently, features are extracted, and then feature normalization is applied. Next, the extracted features are used to train different classifiers, namely MSCNN, a single-scale convolutional neural network, and other traditional classifiers. Among these classifiers, the MSCNN model achieved the best outcomes with a precision of 98.89%, sensitivity of 97.44%, specificity of 94.54%, and accuracy of 94.92%. Overall, the results demonstrate that Raman spectral analysis and MSCNN can be effectively utilized for rapid screening of hepatitis B and C cases. © Springer Science+Business Media, LLC, part of Springer Nature 2021.

Entities:  

Keywords:  Raman spectroscopy; hepatitis-B; hepatitis-C; multiscale convolutional neural network

Year:  2021        PMID: 33972806      PMCID: PMC8099702          DOI: 10.1007/s10812-021-01192-6

Source DB:  PubMed          Journal:  J Appl Spectrosc        ISSN: 0021-9037            Impact factor:   0.816


  39 in total

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Review 2.  Deep learning.

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3.  Deep-Learning-Based Drug-Target Interaction Prediction.

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4.  Study of support vector machine and serum surface-enhanced Raman spectroscopy for noninvasive esophageal cancer detection.

Authors:  Shao-Xin Li; Qiu-Yao Zeng; Lin-Fang Li; Yan-Jiao Zhang; Ming-Ming Wan; Zhi-Ming Liu; Hong-Lian Xiong; Zhou-Yi Guo; Song-Hao Liu
Journal:  J Biomed Opt       Date:  2013-02       Impact factor: 3.170

5.  Identification of new spectral signatures from hepatitis C virus infected human sera.

Authors:  Khulla Naseer; Muhammad Saleem; Safdar Ali; Bushra Mirza; Javaria Qazi
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2019-05-28       Impact factor: 4.098

6.  De novo peptide sequencing by deep learning.

Authors:  Ngoc Hieu Tran; Xianglilan Zhang; Lei Xin; Baozhen Shan; Ming Li
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-18       Impact factor: 11.205

7.  Core protein-nucleic acid interactions in hepatitis C virus as revealed by Raman and circular dichroism spectroscopy.

Authors:  Arantxa Rodríguez-Casado; Marina Molina; Pedro Carmona
Journal:  Appl Spectrosc       Date:  2007-11       Impact factor: 2.388

8.  Hepatitis B virus infection is dependent on cholesterol in the viral envelope.

Authors:  Corinna M Bremer; Christiane Bung; Nicole Kott; Martin Hardt; Dieter Glebe
Journal:  Cell Microbiol       Date:  2008-11-05       Impact factor: 3.715

9.  Raman spectroscopy: elucidation of biochemical changes in carcinogenesis of oesophagus.

Authors:  G Shetty; C Kendall; N Shepherd; N Stone; H Barr
Journal:  Br J Cancer       Date:  2006-05-22       Impact factor: 7.640

10.  Deep learning and 3D-DESI imaging reveal the hidden metabolic heterogeneity of cancer.

Authors:  Paolo Inglese; James S McKenzie; Anna Mroz; James Kinross; Kirill Veselkov; Elaine Holmes; Zoltan Takats; Jeremy K Nicholson; Robert C Glen
Journal:  Chem Sci       Date:  2017-02-21       Impact factor: 9.825

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