Literature DB >> 33972525

Deep learning-based predictive identification of neural stem cell differentiation.

Yanjing Zhu1,2, Ruiqi Huang1,2, Zhourui Wu1,2, Simin Song1,2, Liming Cheng3,4, Rongrong Zhu5,6.   

Abstract

The differentiation of neural stem cells (NSCs) into neurons is proposed to be critical in devising potential cell-based therapeutic strategies for central nervous system (CNS) diseases, however, the determination and prediction of differentiation is complex and not yet clearly established, especially at the early stage. We hypothesize that deep learning could extract minutiae from large-scale datasets, and present a deep neural network model for predictable reliable identification of NSCs fate. Remarkably, using only bright field images without artificial labelling, our model is surprisingly effective at identifying the differentiated cell types, even as early as 1 day of culture. Moreover, our approach showcases superior precision and robustness in designed independent test scenarios involving various inducers, including neurotrophins, hormones, small molecule compounds and even nanoparticles, suggesting excellent generalizability and applicability. We anticipate that our accurate and robust deep learning-based platform for NSCs differentiation identification will accelerate the progress of NSCs applications.

Entities:  

Year:  2021        PMID: 33972525     DOI: 10.1038/s41467-021-22758-0

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  86 in total

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Journal:  Nat Biotechnol       Date:  2014-08       Impact factor: 54.908

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Authors:  Christopher M Madl; Sarah C Heilshorn; Helen M Blau
Journal:  Nature       Date:  2018-05-16       Impact factor: 49.962

8.  Neural stem cells improve cognition via BDNF in a transgenic model of Alzheimer disease.

Authors:  Mathew Blurton-Jones; Masashi Kitazawa; Hilda Martinez-Coria; Nicholas A Castello; Franz-Josef Müller; Jeanne F Loring; Tritia R Yamasaki; Wayne W Poon; Kim N Green; Frank M LaFerla
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Review 9.  Neural stem and progenitor cells in health and disease.

Authors:  Ian Ladran; Ngoc Tran; Aaron Topol; Kristen J Brennand
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2013-09-20

Review 10.  Potential of Stem Cell-Based Therapy for Ischemic Stroke.

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Journal:  Front Neurol       Date:  2018-02-06       Impact factor: 4.003

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  3 in total

1.  Temporal and Locational Values of Images Affecting the Deep Learning of Cancer Stem Cell Morphology.

Authors:  Yumi Hanai; Hiroaki Ishihata; Zaijun Zhang; Ryuto Maruyama; Tomonari Kasai; Hiroyuki Kameda; Tomoyasu Sugiyama
Journal:  Biomedicines       Date:  2022-04-19

2.  Morphology-Based Deep Learning Approach for Predicting Osteogenic Differentiation.

Authors:  Yiqing Lan; Nannan Huang; Yiru Fu; Kehao Liu; He Zhang; Yuzhou Li; Sheng Yang
Journal:  Front Bioeng Biotechnol       Date:  2022-01-27

3.  ADAM10 facilitates rapid neural stem cell cycling and proper positioning within the subventricular zone niche via JAMC/RAP1Gap signaling.

Authors:  Nadia McMillan; Gregory W Kirschen; Sanket Desai; Emma Xia; Stella E Tsirka; Adan Aguirre
Journal:  Neural Regen Res       Date:  2022-11       Impact factor: 6.058

  3 in total

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