Literature DB >> 33971579

Surveillance and molecular characterization of human sapovirus in patients with acute gastroenteritis in Brazil, 2010 to 2017.

Audrey Cilli1, Adriana Luchs2, Simone G Morillo2, Rita de Cassia C Carmona2, Fabiana C P Dos Santos2, Adriana Y Maeda2, Dieli Primo2, Gabriela T Pacheco2, Ellen V Souza2, Roberta S Medeiros2, Maria do Carmo S T Timenetsky3.   

Abstract

BACKGROUND: Human sapoviruses (HuSaV) are associated with acute gastroenteritis (AGE), causing sporadic cases and outbreaks in patients worldwide. In Brazil, however, there are few reports describing the prevalence of HuSaV in patients with AGE.
OBJECTIVE: Describing the diversity of HuSaV in Brazil by detecting and molecularly characterizing HuSaV among patients with AGE during an 8-year period (2010-2017). STUDY
DESIGN: A total of 3974 stool samples, testing negative for rotavirus (RVA), norovirus (NoV) and human adenovirus (HAdV), were selected and screened for the presence of HuSaV. Nested RT-PCR were performed for a partial region of VP1, sequenced and genetic analyzed for genotyping the positive samples.
RESULTS: In the current study, the HuSaV prevalence was determined to be 3.7% (149/3974). A higher prevalence, 5.7% (118/2074), was observed in children under 2 years of age. During the surveillance period, 13 outbreaks were detected: 12 outbreaks in children under 3 years old and one outbreak in adults. Among the 149 HuSaV positive cases, 106 samples (71%) were successfully sequenced. The most prevalent genotype found was GI.1 (44.3%), followed by GI.2 (21.7%), GI.3 (3.8%), GI.6 (2.8%), GII.1 (5.7%), GII.2 (8.5%), GII.3 (2.8%), GII.4 (2.8%), GII.5 (5.7%) and GIV.1 (1.9%). Two GIV.1 strains characterized in this study are, to date, the only strains of this genotype reported in Brazil.
CONCLUSIONS: The present study elucidated the circulation of HuSaV in Brazil and highlight that HuSaV has not assumed an epidemiological importance in the country after the introduction of the RVA vaccine.
Copyright © 2021 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Acute gastroenteritis; Brazil; Genotyping; Outbreak; Sapovirus

Year:  2021        PMID: 33971579     DOI: 10.1016/j.jcv.2021.104844

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  2 in total

1.  Partial Analysis of the Capsid Protein (VP1) of Human Sapovirus Isolated from Children with Diarrhoea in Rural Communities of South Africa.

Authors:  Mpho Magwalivha; Jean-Pierre Kabue Ngandu; Afsatou Ndama Traore; Natasha Potgieter
Journal:  Adv Virol       Date:  2022-06-02

2.  Characterization of a Human Sapovirus Genotype GII.3 Strain Generated by a Reverse Genetics System: VP2 Is a Minor Structural Protein of the Virion.

Authors:  Tian-Cheng Li; Michiyo Kataoka; Yen Hai Doan; Hiroyuki Saito; Hirotaka Takagi; Masamichi Muramatsu; Tomoichiro Oka
Journal:  Viruses       Date:  2022-07-27       Impact factor: 5.818

  2 in total

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