| Literature DB >> 33968792 |
Caley Bryce Shukalek1,2,3,4, Bonita Lee3,5, Sumana Fathima6, Angel Chu1,3, Kevin Fonseca6,7, Ranjani Somayaji1,2,3,4,7,8.
Abstract
Rising rates of syphilis (T. pallidum; Tp) requires rapid diagnosis and treatment to manage the growing epidemic. Syphilis serology is imperfect and requires interpretation of multiple tests while molecular diagnostics allows for potential yes-no identification of highly infective, primary anogenital lesions. Accuracy of this testing modality has thus far been limited to small, highly selective studies. Therefore, we retrospectively assessed a large, adult population of patients with anogenital lesions seen at Sexually Transmitted Infection (STI) clinics in Alberta, Canada who were screened for syphilis and herpes simplex (HSV) 1/2 using PCR to evaluate Tp-PCR versus serology to diagnose primary syphilis. 114 (3.1%) of the 3,600 adult patients had at least one Tp-PCR+ anogenital lesion with 99 (2.8%) patients having newly positive syphilis serology (new INNO-LIA positive or 4-fold RPR increase). Tp-PCR had a sensitivity of 49.3% (95% CI 42.6-56.1) and specificity of 99.9% (99.7-100.0). Positive predictive values and negative predictive values in the study population or when corrected for provincial prevalence were 97.4% (92.5-99.5) or 0.4% (0.4-1.2) and 96.7% (96.1-97.3) or 100.0% (100.0-100.0), respectively. Positive and negative likelihood ratios were estimated at 555 (178-1733) and 0.5 (0.4-0.6), respectively. Review of all Tp-PCR performed with or without exclusion of HSV-positive lesions resulted in no significant change in Tp-PCR characteristics. Interestingly, 12 of the Tp-PCR+ samples had negative serology at time of lesion sampling but became positive within our 28-day testing window. Overall, this study further supports the use of Tp-PCR as an accurate assay to rapidly identify, treat, and prevent the spread of primary syphilis.Entities:
Keywords: anogenital lesions; molecular diagnostic; serology diagnostic; sexually transmitted diseases (STDs); sexually transmitted infections; syphilis; treponema pallidum
Mesh:
Year: 2021 PMID: 33968792 PMCID: PMC8103196 DOI: 10.3389/fcimb.2021.579660
Source DB: PubMed Journal: Front Cell Infect Microbiol ISSN: 2235-2988 Impact factor: 5.293
Patient characteristics all and HSV1/2 negative persons screened with Tp-PCR for anogenital lesions.
| ALL PATIENTS (1 sample/patient) | All | Negative | Positive |
|---|---|---|---|
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| Male | 1851 (51.4) | 1762 (50.5) | 89 (78.1) |
| Age | 30.6 ± 10.6 | 29.6 ± 10.5 | 35.0 ± 12.8* |
| Number of independent PCR tests | 1.2 ± 0.4 | 1.1 ± 0.4* | 1.5 ± 0.8* |
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| Male | 1119 (54.1) | 1039 (52.9) | 80 (76.2) |
| Age | 30.8 ± 11.2* | 30.5 ± 11.0 | 35.2 ± 13.0*$ |
| Number of independent PCR tests | 1.1 ± 0.4* | 1.1 ± 0.4* | 1.4 ± 0.8*$ |
*significant difference from all Tp-PCR results in all patients, denoted by p-value < 0.05.
$significant difference from all Tp-PCR results in HSV1 & HSV2 negative patients, denoted by p-value < 0.05.
Test Characteristics for Tp-PCR among unique patients and independent patient cases with expert clinical suspicion of primary syphilis for all anogenital ulcers sampled and HSV1/2 negative anogenital ulcers sampled.
| All Anogenital Ulcers | HSV1/2 Negative Anogenital Ulcers | ||
|---|---|---|---|
| One Sample per Patient | One Sample per Patient | ||
| Sensitivity | 49.3 (42.6-56.1) | Sensitivity | 49.3 (42.3-56.3) |
| Specificity | 99.9 (99.7-100) | Specificity | 99.8 (99.5-100) |
| PPV | 97.4 (92.5-99.5) | PPV | 97.1 (91.9-99.4) |
| corr. for pop. prev | 0.4 (0.1-1.2) | corr. for pop. prev | 0.2 (0.1-0.7) |
| NPV | 96.7 (96.1-97.3) | NPV | 94.7 (93.6-95.6) |
| corr. for pop. prev | 100.0 (100.0-100.0) | corr. for pop. prev | 100 (100–100) |
| LR+ | 555 (178–1733) | LR+ | 306 (98–955) |
| LR- | 0.5 (0.4-0.6) | LR- | 0.5 (0.4-0.6) |
| All Samples | All Samples | ||
| Sensitivity | 54.8 (49.0-60.5) | Sensitivity | 53.7 (47.6-59.7) |
| Specificity | 99.9 (99.8-100.0) | Specificity | 99.9 (99.6-100.0) |
| PPV | 98.2 (94.9-99.6) | PPV | 98.1 (89.7-100) |
| PPV *(provincial) | 0.5 (0.2-1.5) | PPV *(provincial) | 0.3 (0.1-0.8) |
| NPV | 96.6 (96.0-97.1) | NPV | 18.2 (8.2-32.7) |
| PPV *(provincial) | 100 (100–100) | PPV *(provincial) | 100 (100–100) |
| LR+ | 705 (226–2194) | LR+ | 375 (121–1169) |
| LR- | 0.5 (0.4-0.5) | LR- | 0.5 (0.4-0.5) |
*(provincial) – estimated value using reported rate of primary syphilis cases in Alberta over the study period (2008–2014).