| Literature DB >> 33960680 |
Feng Tang1, Yu-Hang Zhao1, Qing Zhang1, Wei Wei1, Su-Fang Tian2, Chen Li1, Jie Yao3, Ze-Fen Wang4, Zhi-Qiang Li1.
Abstract
AIMS: High immune cell infiltration in gliomas establishes an immunosuppressive tumor microenvironment, which in turn promotes resistance to immunotherapy. Hence, it is important to identify novel targets associated with high immune cell infiltration in gliomas. Our previous study showed that serum levels of beta-2 microglobulin (B2M) in lower-grade glioma patients were lower than those in glioblastoma patients. In the present study, we focused on exploring the roles of B2M in glioma immune infiltration.Entities:
Keywords: B2M; gliomas; immunologic microenvironment; survival
Mesh:
Substances:
Year: 2021 PMID: 33960680 PMCID: PMC8265948 DOI: 10.1111/cns.13649
Source DB: PubMed Journal: CNS Neurosci Ther ISSN: 1755-5930 Impact factor: 5.243
Statistical results of immunofluorescence intensity of B2M protein in LGGs and GBMs
| Intensity | LGGs | GBMs | Total |
|---|---|---|---|
| Weak | 29 (28.2%) | 6 (5.8%) | 35 (34%) |
| Moderate | 26 (25.2%) | 14 (13.6%) | 40 (38.8%) |
| Strong | 10 (9.7%) | 18 (17.5%) | 28 (27.2%) |
| Total | 65 (63.1%) | 38 (36.9%) | 103 (100%) |
LGGs (n = 65), lower‐grade gliomas; GBMs (n = 38), glioblastomas.
Abbreviations: B2M, beta‐2 microglobulin; GBM, glioblastoma; LGG, lower‐grade glioma.
Statistical results of immunofluorescence intensity of beta‐2 microglobulin protein in IDH1 wild‐type and IDH1 mutant gliomas
| Intensity | IDH1 wild type | IDH1 mutant | Total |
|---|---|---|---|
| Weak | 8 (7.8%) | 27 (26.2%) | 35 (34%) |
| Moderate | 23 (22.3%) | 17 (16.5%) | 40 (38.8%) |
| Strong | 26 (25.2%) | 2 (2%) | 28 (27.2%) |
| Total | 57 (55.3%) | 46 (44.7%) | 103 (100%) |
IDH1 wild‐type gliomas (n = 57); IDH1 mutant gliomas (n = 46).
FIGURE 1Beta‐2 microglobulin (B2M) mRNA levels in tumors and corresponding normal tissues. (A) B2M mRNA levels in 33 tumor types in the The Cancer Genome Atlas dataset. (B) B2M expression in lower‐grade gliomas (LGGs) and glioblastomas (GBMs) in the Gravendeel dataset
FIGURE 2Beta‐2 microglobulin (B2M) mRNA levels in different grades and IDH1 statuses of gliomas. (A) B2M mRNA levels in different grades of gliomas B. B2M mRNA levels in different IDH1 statuses of gliomas
FIGURE 3Beta‐2 microglobulin (B2M) protein levels in tumor tissues from glioma patients. (A, B) B2M protein levels in lower‐grade glioma (LGG) and glioblastoma (GBM) tissues. (C, D) B2M protein levels in different IDH1 status tissues
FIGURE 4The expression pattern and predictive role of beta‐2 microglobulin (B2M) in the mesenchymal molecular subtype of gliomas. (A) B2M mRNA levels in different molecular subtypes of gliomas across three databases. (B) ROC curves of B2M in predicting the mesenchymal subtype of gliomas in three databases
FIGURE 5Beta‐2 microglobulin (B2M) is a potential marker for the prognosis of glioma patients. A. Survival probabilities of glioma patients in the high and low B2M groups across three databases. B. Forest plot shows that high B2M expression corresponded to a poor survival time compared to that of low B2M expression in glioma patients from three databases
FIGURE 6Beta‐2 microglobulin (B2M) is related to migration of immune cells in gliomas. (A) The top‐50 genes related to B2M expression. B. The top‐10 GO terms in the B2M‐associated biological processes
FIGURE 7Beta‐2 microglobulin (B2M) is associated with immune cell infiltration. (A, B) Relationship between B2M expression and levels of immune infiltration in lower‐grade gliomas (LGGs) and glioblastomas (GBMs)
FIGURE 8Beta‐2 microglobulin (B2M) regulates immune infiltration through chemokines in gliomas. (A) B2M‐associated pathways in gliomas. (B) Co‐expression of chemokines and B2M in gliomas
Univariate analysis of the correlation among B2M expression, immune infiltration, and OS in patients with gliomas
| Glioma | Variable |
|
|---|---|---|
| LGGs | B cell | 4.25E−05 |
| LGGs | CD8+ T cell | 0.009535293 |
| LGGs | CD4+ T cell | 0.000460305 |
| LGGs | Macrophage | 9.20E−06 |
| LGGs | Neutrophil | 5.83E−06 |
| LGGs | Dendritic cell | 0.000634174 |
| LGGs | B2M | 0.000118692 |
| GBMs | B cell | 0.105243251 |
| GBMs | CD8+ T cell | 0.805152757 |
| GBMs | CD4+ T cell | 0.629122347 |
| GBMs | Macrophage | 0.755368558 |
| GBMs | Neutrophil | 0.741002234 |
| GBMs | Dendritic cell | 0.001616954 |
| GBMs | B2M | 0.003233862 |
LGGs (n = 505), lower‐grade gliomas; GBMs (n = 523), glioblastomas.
Abbreviations: B2M, beta‐2 microglobulin; GBM, glioblastoma; LGG, lower‐grade glioma.
Abbreviations and full names
| Abbreviations | Full names |
|---|---|
| B2M | Beta‐2 microglobulin |
| TCGA | The Cancer Genome Atlas |
| CGGA | Chinese Glioma Genome Atlas |
| GTEx | Genotype‐Tissue Expression Project |
| MHC‐I | Major histocompatibility complex class I |
| HLA | Human leukocyte antigen |
| GBMs | Glioblastomas |
| LGGs | Brain lower‐grade gliomas |
| ACC | Adrenocortical carcinoma |
| BLCA | Bladder urothelial carcinoma |
| BRCA | Breast invasive carcinoma |
| CESC | Cervical squamous cell carcinoma and endocervical adenocarcinoma |
| CHOL | Cholangio carcinoma |
| COAD | Colon adenocarcinoma |
| DLBC | Lymphoid neoplasm diffuse large B‐cell lymphoma |
| ESCA | Esophageal carcinoma |
| HNSC | Head and neck squamous cell carcinoma |
| KICH | Kidney chromophobe |
| KIRC | Kidney renal clear cell carcinoma |
| KIRP | Kidney renal papillary cell carcinoma |
| LAML | Acute myeloid leukemia |
| LIHC | Liver hepatocellular carcinoma |
| LUAD | Lung adenocarcinoma |
| LUSC | Lung squamous cell carcinoma |
| MESO | Mesothelioma |
| OV | Ovarian serous cystadenocarcinoma |
| PAAD | Pancreatic adenocarcinoma |
| PCPG | Pheochromocytoma and paraganglioma |
| PRAD | Prostate adenocarcinoma |
| READ | Rectum adenocarcinoma |
| SARC | Sarcoma |
| SKCM | Skin cutaneous melanoma |
| STAD | Stomach adenocarcinoma |
| TGCT | Testicular germ cell tumors |
| THCA | Thyroid carcinoma |
| THYM | Thymoma |
| UCEC | Uterine corpus endometrial carcinoma |
| UCS | Uterine carcinosarcoma |
| UVM | Uveal melanoma |
| AUCs | Areas under the curves |
| ROC | Receiver operating characteristic curve |
| CI | Confidence interval |
| OS | Overall survival |
| GEPIA | Gene Expression Profiling Interactive Analysis |
| HPA | Human Protein Atlas |
| WHO | World Health Organization |
| GO | Gene‐ontology |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| BSA | Bovine serum albumin |