Literature DB >> 33957053

Structures and Functions of Chromatin Fibers.

Ping Chen1,2, Wei Li3,4,5, Guohong Li2,6.   

Abstract

In eukaryotes, genomic DNA is packaged into chromatin in the nucleus. The accessibility of DNA is dependent on the chromatin structure and dynamics, which essentially control DNA-related processes, including transcription, DNA replication, and repair. All of the factors that affect the structure and dynamics of nucleosomes, the nucleosome-nucleosome interaction interfaces, and the binding of linker histones or other chromatin-binding proteins need to be considered to understand the organization and function of chromatin fibers. In this review, we provide a summary of recent progress on the structure of chromatin fibers in vitro and in the nucleus, highlight studies on the dynamic regulation of chromatin fibers, and discuss their related biological functions and abnormal organization in diseases.

Keywords:  chromatin fiber; epigenetic regulation; linker histone; structural dynamics; tetranucleosome; transcription

Mesh:

Substances:

Year:  2021        PMID: 33957053     DOI: 10.1146/annurev-biophys-062920-063639

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  6 in total

1.  Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.

Authors:  Marco Dombrowski; Maik Engeholm; Christian Dienemann; Svetlana Dodonova; Patrick Cramer
Journal:  Nat Struct Mol Biol       Date:  2022-05-17       Impact factor: 18.361

2.  Endogenous expression and localization of HIS-72::mTurquoise2 in C. elegans.

Authors:  Dillon E Sloan; Joshua N Bembenek
Journal:  MicroPubl Biol       Date:  2021-09-29

3.  Lysine Methylation Modulates the Interaction of Archaeal Chromatin Protein Cren7 With DNA.

Authors:  Niannian Ding; Yuanyuan Chen; Yindi Chu; Cheng Zhong; Li Huang; Zhenfeng Zhang
Journal:  Front Microbiol       Date:  2022-03-03       Impact factor: 5.640

Review 4.  Targeting the Nucleosome Acidic Patch by Viral Proteins: Two Birds with One Stone?

Authors:  Floriane Lagadec; Vincent Parissi; Paul Lesbats
Journal:  mBio       Date:  2022-03-28       Impact factor: 7.867

5.  A Bottom-Up Coarse-Grained Model for Nucleosome-Nucleosome Interactions with Explicit Ions.

Authors:  Tiedong Sun; Vishal Minhas; Alexander Mirzoev; Nikolay Korolev; Alexander P Lyubartsev; Lars Nordenskiöld
Journal:  J Chem Theory Comput       Date:  2022-05-17       Impact factor: 6.578

6.  Chromatin Liquid-Liquid Phase Separation (LLPS) Is Regulated by Ionic Conditions and Fiber Length.

Authors:  Qinming Chen; Lei Zhao; Aghil Soman; Anastasia Yu Arkhipova; Jindi Li; Hao Li; Yinglu Chen; Xiangyan Shi; Lars Nordenskiöld
Journal:  Cells       Date:  2022-10-06       Impact factor: 7.666

  6 in total

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