Literature DB >> 33953918

Some lessons from COVID: science and communication.

Edward N Baker1.   

Abstract

Biomedical challenges such as the present COVID-19 pandemic require both good science and excellent communication between scientists and the general public. This underscores the importance of presenting our science in innovative ways that make it accessible to all. © Edward N. Baker 2021.

Entities:  

Keywords:  COVID-19; SARS-CoV-2; coronaviruses; editorial; scientific communication

Year:  2021        PMID: 33953918      PMCID: PMC8086169          DOI: 10.1107/S2052252521003894

Source DB:  PubMed          Journal:  IUCrJ        ISSN: 2052-2525            Impact factor:   4.769


What a turbulent and (for many) traumatic year we have experienced since my editorial of last May (Baker, 2020 ▸)! Responses around the world have varied greatly as nations sought to find a way through the current COVID-19 pandemic, and there are surely many lessons to be learned by all of us. My vantage point, as I write, is a rather privileged one, living as I do in a country in which there have been very few deaths (26 in a population of 5 million). We were fortunate in having time to observe the spread of the pandemic in other countries before it could take hold seriously here. But some aspects of our response are of universal relevance. A key factor in New Zealand’s experience was the excellence of scientific communication, and the willingness of both the government and the general public to listen. Scientists had direct access to government and a strong role in policy development, and daily briefings by the Prime Minister and our Director-General of Health became essential listening. Some superb science communicators emerged, one of whom, Dr Siouxsie Wiles, a microbiologist from the University of Auckland, has recently been chosen as New Zealander of the Year. It seems to me that one outcome – here at least – has been a thirst for scientific information, and an accompanying rise in the estimation of science. Many more people now know what a virus looks like, and can talk about the ‘spike protein’. And also know that proteins are much more than something you eat! How do these issues impact on scientific publication, and on open-access journals such as in particular? It is in the speed with which an open-access article addressing a topic of major public interest can become widely disseminated. Almost immediately after publication of my 2020 editorial on the rapidity of the structural biology response to the COVID pandemic, I found substantial portions being quoted on Facebook and began receiving emails from family and friends from all around the world. Likewise, Wladek Minor, lead author on an article in the present issue of (Grabowski et al., 2021 ▸), tells me that he has never before received such immediate worldwide attention and interest. His article focused on protocols and tools to enable more effective responses to future biomedical threats. At the same time, this mobilization of structural biology to address the COVID pandemic poses real challenges of communication. There has been explosive growth in the number of structures solved for components of the SARS-CoV-2 virus. At time of writing, the worldwide Protein Data Bank (wwPDB) contains more than 1000 such structures, all solved in the past year. These include 345 structures of the spike protein (the principal target of vaccines), exploring conformational variations, effects of mutations, and the binding of ligands; 300 structures of the main protease, a key drug target, with and without ligands or drug candidates bound; and 489 other structures of proteins, RNA etc. So far, few of these have been published in journal articles – the days of one structure, one paper, are long gone! Often only the first few structures for a given protein are published, e.g. for the SARS-CoV-2 spike protein (Walls et al., 2020 ▸; Wrapp et al., 2020 ▸) or for the main protease 3CLpro (Zhang et al., 2020 ▸; Jin et al., 2020 ▸). A rich resource remains, however, and the challenge is to sort through these data to extract new and interesting insights. Several such papers have been published in over the past year. One such, a retrospective cryo-EM analysis, reveals the considerable flexibility that exists in the spike protein in its pre-fusion state, before engagement with its cell receptor (Melero et al., 2020 ▸). Another (Jaskolski et al., 2021 ▸) compares and analyses 81 crystal structures of the main protease 3CLpro from SARS-CoV-2 to assess their quality and consistency, with a view to establishing firm bases for drug development. I feel sure that many more issues of significant public interest can be brought forward from these structural data, for example on the structural effects of mutations and how these may influence vaccine efficacy or drug development. As a final comment I encourage our writers to bring their science forward in ways that are more accessible to the general public. We could certainly expand the number of Scientific Commentaries we publish, but I am thinking of something briefer and more accessible to all, in the form of short news items, informed by science. There is certainly an appetite for that at the present time.
  6 in total

1.  Structure of Mpro from SARS-CoV-2 and discovery of its inhibitors.

Authors:  Zhenming Jin; Xiaoyu Du; Yechun Xu; Yongqiang Deng; Meiqin Liu; Yao Zhao; Bing Zhang; Xiaofeng Li; Leike Zhang; Chao Peng; Yinkai Duan; Jing Yu; Lin Wang; Kailin Yang; Fengjiang Liu; Rendi Jiang; Xinglou Yang; Tian You; Xiaoce Liu; Xiuna Yang; Fang Bai; Hong Liu; Xiang Liu; Luke W Guddat; Wenqing Xu; Gengfu Xiao; Chengfeng Qin; Zhengli Shi; Hualiang Jiang; Zihe Rao; Haitao Yang
Journal:  Nature       Date:  2020-04-09       Impact factor: 49.962

2.  Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation.

Authors:  Daniel Wrapp; Nianshuang Wang; Kizzmekia S Corbett; Jory A Goldsmith; Ching-Lin Hsieh; Olubukola Abiona; Barney S Graham; Jason S McLellan
Journal:  Science       Date:  2020-02-19       Impact factor: 47.728

3.  Visualizing an unseen enemy; mobilizing structural biology to counter COVID-19.

Authors:  Edward N Baker
Journal:  IUCrJ       Date:  2020-04-06       Impact factor: 4.769

4.  Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures.

Authors:  Roberto Melero; Carlos Oscar S Sorzano; Brent Foster; José-Luis Vilas; Marta Martínez; Roberto Marabini; Erney Ramírez-Aportela; Ruben Sanchez-Garcia; David Herreros; Laura Del Caño; Patricia Losana; Yunior C Fonseca-Reyna; Pablo Conesa; Daniel Wrapp; Pablo Chacon; Jason S McLellan; Hemant D Tagare; Jose-Maria Carazo
Journal:  IUCrJ       Date:  2020-09-29       Impact factor: 4.769

5.  Crystallographic models of SARS-CoV-2 3CLpro: in-depth assessment of structure quality and validation.

Authors:  Mariusz Jaskolski; Zbigniew Dauter; Ivan G Shabalin; Miroslaw Gilski; Dariusz Brzezinski; Marcin Kowiel; Bernhard Rupp; Alexander Wlodawer
Journal:  IUCrJ       Date:  2021-02-09       Impact factor: 4.769

6.  Crystal structure of SARS-CoV-2 main protease provides a basis for design of improved α-ketoamide inhibitors.

Authors:  Linlin Zhang; Daizong Lin; Xinyuanyuan Sun; Ute Curth; Christian Drosten; Lucie Sauerhering; Stephan Becker; Katharina Rox; Rolf Hilgenfeld
Journal:  Science       Date:  2020-03-20       Impact factor: 47.728

  6 in total

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