Literature DB >> 33942671

Eight-gene prognostic signature associated with hypoxia and ferroptosis for gastric cancer with general applicability.

Junyu Huo1,2, Liqun Wu1, Yunjin Zang1.   

Abstract

Aims: To investigate the prognostic significance of hypoxia- and ferroptosis-related genes for gastric cancer (GC). Materials & methods: We extracted data on 259 hypoxia- and ferroptosis-related genes from The Cancer Genome Atlas and identified the differentially expressed genes between normal (n = 32) and tumor (n = 375) tissues. A risk score was established by univariate Cox regression analysis and LASSO penalized Cox regression analysis.
Results: The risk score contained eight genes showed good performance in predicting overall survival and relapse-free survival in GC patients in both the training cohort (The Cancer Genome Atlas, n = 350) and the testing cohorts (GSE84437, n = 431; GSE62254, n = 300; GSE15459, n = 191; GSE26253, n = 432).
Conclusion: The eight-gene signature may help to the improve the prognostic risk classification of GC.

Entities:  

Keywords:  TCGA; epigenomics; ferroptosis; gastric cancer; genomics; hypoxia; prognostic; risk score; signature; transcriptomics

Mesh:

Substances:

Year:  2021        PMID: 33942671     DOI: 10.2217/epi-2020-0411

Source DB:  PubMed          Journal:  Epigenomics        ISSN: 1750-192X            Impact factor:   4.778


  9 in total

1.  Identification of Hypoxia-Related Subtypes, Establishment of Prognostic Models, and Characteristics of Tumor Microenvironment Infiltration in Colon Cancer.

Authors:  Changjing Wang; Yujie Tang; Hongqing Ma; Sisi Wei; Xuhua Hu; Lianmei Zhao; Guiying Wang
Journal:  Front Genet       Date:  2022-06-17       Impact factor: 4.772

2.  Identification and validation of a novel immune-related signature associated with macrophages and CD8 T cell infiltration predicting overall survival for hepatocellular carcinoma.

Authors:  Junyu Huo; Liqun Wu; Yunjin Zang
Journal:  BMC Med Genomics       Date:  2021-09-20       Impact factor: 3.063

Review 3.  Ferroptosis: A Double-Edged Sword in Gastrointestinal Disease.

Authors:  Chengfei Xu; Ziling Liu; Jiangwei Xiao
Journal:  Int J Mol Sci       Date:  2021-11-17       Impact factor: 5.923

4.  A Five-Gene Signature Associated With DNA Damage Repair Molecular Subtype Predict Overall Survival for Hepatocellular Carcinoma.

Authors:  Junyu Huo; Xinyi Fan; Bingxin Qi; Peng Sun
Journal:  Front Genet       Date:  2022-01-20       Impact factor: 4.599

5.  Construction of a survival nomogram for gastric cancer based on the cancer genome atlas of m6A-related genes.

Authors:  Xiaokang Wang; Kexin Xu; Xueyi Liao; Jiaoyu Rao; Kaiyuan Huang; Jianlin Gao; Gengrui Xu; Dengchuan Wang
Journal:  Front Genet       Date:  2022-08-05       Impact factor: 4.772

Review 6.  Role of ferroptosis and ferroptosis-related non-coding RNAs in the occurrence and development of gastric cancer.

Authors:  Ling Lu; Bei Chen; Yumeng Xu; Xinyi Zhang; Longtao Jin; Hui Qian; Yi Wang; Zhao Feng Liang
Journal:  Front Pharmacol       Date:  2022-08-15       Impact factor: 5.988

7.  Identification of immune-related ferroptosis prognostic marker and in-depth bioinformatics exploration of multi-omics mechanisms in thyroid cancer.

Authors:  Xin Fan; Fei Xie; Lingling Zhang; Chang Tong; Zhiyuan Zhang
Journal:  Front Mol Biosci       Date:  2022-08-17

8.  Establishment of a Novel Prognostic Prediction Model for Gastric Cancer Based on Necroptosis-Related Genes.

Authors:  Zhong-Zhong Zhu; Guanglin Zhang; Jianping Liu
Journal:  Pathol Oncol Res       Date:  2022-09-15       Impact factor: 2.874

9.  A nine-consensus-prognostic -gene-based prognostic signature, recognizing the dichotomized subgroups of gastric cancer patients with different clinical outcomes and therapeutic strategies.

Authors:  Dan Ji; Yang Yang; Fei Zhou; Chao Li
Journal:  Front Genet       Date:  2022-09-26       Impact factor: 4.772

  9 in total

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