Literature DB >> 33941927

Reactive, reproducible, collaborative: computational notebooks evolve.

Jeffrey M Perkel.   

Abstract

Keywords:  Computational biology and bioinformatics; Computer science; Software

Year:  2021        PMID： 33941927     DOI： 10.1038/d41586-021-01174-w

Source DB:  PubMed          Journal:  Nature        ISSN： 0028-0836            Impact factor:   49.962


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  4 in total

1.  Beyond advertising: New infrastructures for publishing integrated research objects.

Authors:  Elizabeth DuPre; Chris Holdgraf; Agah Karakuzu; Loïc Tetrel; Pierre Bellec; Nikola Stikov; Jean-Baptiste Poline
Journal:  PLoS Comput Biol       Date:  2022-01-06       Impact factor: 4.475

2.  RASCL: Rapid Assessment Of SARS-CoV-2 Clades Through Molecular Sequence Analysis.

Authors:  Alexander G Lucaci; Jordan D Zehr; Stephen D Shank; Dave Bouvier; Han Mei; Anton Nekrutenko; Darren P Martin; Sergei L Kosakovsky Pond
Journal:  bioRxiv       Date:  2022-01-18

3.  Validating the knowledge bank approach for personalized prediction of survival in acute myeloid leukemia: a reproducibility study.

Authors:  Yujun Xu; Ulrich Mansmann
Journal:  Hum Genet       Date:  2022-04-16       Impact factor: 5.881

4.  A survey of researchers' code sharing and code reuse practices, and assessment of interactive notebook prototypes.

Authors:  Lauren Cadwallader; Iain Hrynaszkiewicz
Journal:  PeerJ       Date:  2022-08-22       Impact factor: 3.061
  4 in total

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