Literature DB >> 33936504

DenseCNN: A Densely Connected CNN Model for Alzheimer's Disease Classification Based on Hippocampus MRI Data.

Qinyong Wang1, Yanshu Li2, Chunlei Zheng2, Rong Xu2.   

Abstract

Alzheimer's Disease (AD) is a common type of dementia, affecting human memory, language ability and behavior. Hippocampus is an important biomarker for AD diagnosis. Previous hippocampus-based biomarker analyses mainly focused on volume, texture and shape of the bilateral hippocampus. 3D convolutional neural networks (CNNs) can understand and extract complex morphology features from Magnetic resonance imaging (MRI) and have recently been developed for hippocampus-based AD classification. However, existing CNN models often have highly complex structures and require large amounts of training data. Here we propose an accurate and lightweight Densely Connected 3D convolutional neural network (DenseCNN) for AD classification based on hippocampus segments. DenseCNN was trained on 746 and tested on 187 pairs of hippocampus from Alzheimer's Disease Neuroimaging Initiative (ADNI) databases. DenseCNN has an average accuracy of 0.898, sensitivity of 0.985, specificity of 0.852, and area under curve (A UC) of0.979, which are better than or comparable to state-of-art approaches. ©2020 AMIA - All rights reserved.

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Year:  2021        PMID: 33936504      PMCID: PMC8075423     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  10 in total

1.  A deep learning model for early prediction of Alzheimer's disease dementia based on hippocampal magnetic resonance imaging data.

Authors:  Hongming Li; Mohamad Habes; David A Wolk; Yong Fan
Journal:  Alzheimers Dement       Date:  2019-06-11       Impact factor: 21.566

2.  Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: the CADDementia challenge.

Authors:  Esther E Bron; Marion Smits; Wiesje M van der Flier; Hugo Vrenken; Frederik Barkhof; Philip Scheltens; Janne M Papma; Rebecca M E Steketee; Carolina Méndez Orellana; Rozanna Meijboom; Madalena Pinto; Joana R Meireles; Carolina Garrett; António J Bastos-Leite; Ahmed Abdulkadir; Olaf Ronneberger; Nicola Amoroso; Roberto Bellotti; David Cárdenas-Peña; Andrés M Álvarez-Meza; Chester V Dolph; Khan M Iftekharuddin; Simon F Eskildsen; Pierrick Coupé; Vladimir S Fonov; Katja Franke; Christian Gaser; Christian Ledig; Ricardo Guerrero; Tong Tong; Katherine R Gray; Elaheh Moradi; Jussi Tohka; Alexandre Routier; Stanley Durrleman; Alessia Sarica; Giuseppe Di Fatta; Francesco Sensi; Andrea Chincarini; Garry M Smith; Zhivko V Stoyanov; Lauge Sørensen; Mads Nielsen; Sabina Tangaro; Paolo Inglese; Christian Wachinger; Martin Reuter; John C van Swieten; Wiro J Niessen; Stefan Klein
Journal:  Neuroimage       Date:  2015-01-31       Impact factor: 6.556

3.  Cerebrospinal fluid biomarker signature in Alzheimer's disease neuroimaging initiative subjects.

Authors:  Leslie M Shaw; Hugo Vanderstichele; Malgorzata Knapik-Czajka; Christopher M Clark; Paul S Aisen; Ronald C Petersen; Kaj Blennow; Holly Soares; Adam Simon; Piotr Lewczuk; Robert Dean; Eric Siemers; William Potter; Virginia M-Y Lee; John Q Trojanowski
Journal:  Ann Neurol       Date:  2009-04       Impact factor: 10.422

4.  The Australian Imaging, Biomarkers and Lifestyle (AIBL) study of aging: methodology and baseline characteristics of 1112 individuals recruited for a longitudinal study of Alzheimer's disease.

Authors:  Kathryn A Ellis; Ashley I Bush; David Darby; Daniela De Fazio; Jonathan Foster; Peter Hudson; Nicola T Lautenschlager; Nat Lenzo; Ralph N Martins; Paul Maruff; Colin Masters; Andrew Milner; Kerryn Pike; Christopher Rowe; Greg Savage; Cassandra Szoeke; Kevin Taddei; Victor Villemagne; Michael Woodward; David Ames
Journal:  Int Psychogeriatr       Date:  2009-05-27       Impact factor: 3.878

5.  Positron emission tomography study of human brain functional development.

Authors:  H T Chugani; M E Phelps; J C Mazziotta
Journal:  Ann Neurol       Date:  1987-10       Impact factor: 10.422

6.  A multi-model deep convolutional neural network for automatic hippocampus segmentation and classification in Alzheimer's disease.

Authors:  Manhua Liu; Fan Li; Hao Yan; Kundong Wang; Yixin Ma; Li Shen; Mingqing Xu
Journal:  Neuroimage       Date:  2019-12-16       Impact factor: 6.556

7.  MRI of hippocampal volume loss in early Alzheimer's disease in relation to ApoE genotype and biomarkers.

Authors:  N Schuff; N Woerner; L Boreta; T Kornfield; L M Shaw; J Q Trojanowski; P M Thompson; C R Jack; M W Weiner
Journal:  Brain       Date:  2009-02-27       Impact factor: 13.501

8.  End-to-end lung cancer screening with three-dimensional deep learning on low-dose chest computed tomography.

Authors:  Diego Ardila; Atilla P Kiraly; Sujeeth Bharadwaj; Bokyung Choi; Joshua J Reicher; Lily Peng; Daniel Tse; Mozziyar Etemadi; Wenxing Ye; Greg Corrado; David P Naidich; Shravya Shetty
Journal:  Nat Med       Date:  2019-05-20       Impact factor: 53.440

9.  Hippocampal segmentation for brains with extensive atrophy using three-dimensional convolutional neural networks.

Authors:  Maged Goubran; Emmanuel Edward Ntiri; Hassan Akhavein; Melissa Holmes; Sean Nestor; Joel Ramirez; Sabrina Adamo; Miracle Ozzoude; Christopher Scott; Fuqiang Gao; Anne Martel; Walter Swardfager; Mario Masellis; Richard Swartz; Bradley MacIntosh; Sandra E Black
Journal:  Hum Brain Mapp       Date:  2019-10-14       Impact factor: 5.038

10.  CSF biomarkers of Alzheimer's disease concord with amyloid-β PET and predict clinical progression: A study of fully automated immunoassays in BioFINDER and ADNI cohorts.

Authors:  Oskar Hansson; John Seibyl; Erik Stomrud; Henrik Zetterberg; John Q Trojanowski; Tobias Bittner; Valeria Lifke; Veronika Corradini; Udo Eichenlaub; Richard Batrla; Katharina Buck; Katharina Zink; Christina Rabe; Kaj Blennow; Leslie M Shaw
Journal:  Alzheimers Dement       Date:  2018-03-01       Impact factor: 21.566

  10 in total
  1 in total

1.  Predict Alzheimer's disease using hippocampus MRI data: a lightweight 3D deep convolutional network model with visual and global shape representations.

Authors:  Sreevani Katabathula; Qinyong Wang; Rong Xu
Journal:  Alzheimers Res Ther       Date:  2021-05-24       Impact factor: 6.982

  1 in total

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