Literature DB >> 33936489

Natural Language Processing and Machine Learning to Enable Clinical Decision Support for Treatment of Pediatric Pneumonia.

Joshua C Smith1, Ashley Spann1, Allison B McCoy1, Jakobi A Johnson1, Donald H Arnold1, Derek J Williams1, Asli O Weitkamp1.   

Abstract

Pneumonia is the most frequent cause of infectious disease-related deaths in children worldwide. Clinical decision support (CDS) applications can guide appropriate treatment, but the system must first recognize the appropriate diagnosis. To enable CDS for pediatric pneumonia, we developed an algorithm integrating natural language processing (NLP) and random forest classifiers to identify potential pediatric pneumonia from radiology reports. We deployed the algorithm in the EHR of a large children's hospital using real-time NLP. We describe the development and deployment of the algorithm, and evaluate our approach using 9-months of data gathered while the system was in use. Our model, trained on individual radiology reports, had an AUC of 0.954. The intervention, evaluated on patient encounters that could include multiple radiology reports, achieved a sensitivity, specificity, and positive predictive value of0.899, 0.949, and 0.781, respectively. ©2020 AMIA - All rights reserved.

Entities:  

Year:  2021        PMID: 33936489      PMCID: PMC8075487     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  25 in total

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Journal:  J Biomed Inform       Date:  2001-10       Impact factor: 6.317

2.  Disagreement in the interpretation of chest radiographs among specialists and clinical outcomes of patients hospitalized with suspected pneumonia.

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Journal:  Eur J Intern Med       Date:  2006-01       Impact factor: 4.487

3.  The management of community-acquired pneumonia in infants and children older than 3 months of age: clinical practice guidelines by the Pediatric Infectious Diseases Society and the Infectious Diseases Society of America.

Authors:  John S Bradley; Carrie L Byington; Samir S Shah; Brian Alverson; Edward R Carter; Christopher Harrison; Sheldon L Kaplan; Sharon E Mace; George H McCracken; Matthew R Moore; Shawn D St Peter; Jana A Stockwell; Jack T Swanson
Journal:  Clin Infect Dis       Date:  2011-08-31       Impact factor: 9.079

4.  A natural language understanding system combining syntactic and semantic techniques.

Authors:  P Haug; S Koehler; L M Lau; P Wang; R Rocha; S Huff
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1994

5.  Radiological findings in 210 paediatric patients with viral pneumonia: a retrospective case study.

Authors:  W Guo; J Wang; M Sheng; M Zhou; L Fang
Journal:  Br J Radiol       Date:  2012-04-18       Impact factor: 3.039

6.  NLP-based identification of pneumonia cases from free-text radiological reports.

Authors:  Peter L Elkin; David Froehling; Dietlind Wahner-Roedler; Brett Trusko; Gail Welsh; Haobo Ma; Armen X Asatryan; Jerome I Tokars; S Trent Rosenbloom; Steven H Brown
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

7.  Predicting Severe Pneumonia Outcomes in Children.

Authors:  Derek J Williams; Yuwei Zhu; Carlos G Grijalva; Wesley H Self; Frank E Harrell; Carrie Reed; Chris Stockmann; Sandra R Arnold; Krow K Ampofo; Evan J Anderson; Anna M Bramley; Richard G Wunderink; Jonathan A McCullers; Andrew T Pavia; Seema Jain; Kathryn M Edwards
Journal:  Pediatrics       Date:  2016-10       Impact factor: 7.124

8.  ConText: an algorithm for determining negation, experiencer, and temporal status from clinical reports.

Authors:  Henk Harkema; John N Dowling; Tyler Thornblade; Wendy W Chapman
Journal:  J Biomed Inform       Date:  2009-05-10       Impact factor: 6.317

9.  Epidemiology of pediatric hospitalizations at general hospitals and freestanding children's hospitals in the United States.

Authors:  JoAnna K Leyenaar; Shawn L Ralston; Meng-Shiou Shieh; Penelope S Pekow; Rita Mangione-Smith; Peter K Lindenauer
Journal:  J Hosp Med       Date:  2016-07-04       Impact factor: 2.960

10.  Automated identification of pneumonia in chest radiograph reports in critically ill patients.

Authors:  Vincent Liu; Mark P Clark; Mark Mendoza; Ramin Saket; Marla N Gardner; Benjamin J Turk; Gabriel J Escobar
Journal:  BMC Med Inform Decis Mak       Date:  2013-08-15       Impact factor: 2.796

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  1 in total

Review 1.  Artificial intelligence-based clinical decision support in pediatrics.

Authors:  Sriram Ramgopal; L Nelson Sanchez-Pinto; Christopher M Horvat; Michael S Carroll; Yuan Luo; Todd A Florin
Journal:  Pediatr Res       Date:  2022-07-29       Impact factor: 3.953

  1 in total

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