Literature DB >> 33936438

Coding Free-Text Chief Complaints from a Health Information Exchange: A Preliminary Study.

Sotiris Karagounis1, Indra Neil Sarkar1,2, Elizabeth S Chen1.   

Abstract

Chief complaints are important textual data that can serve to enrich diagnosis and symptom data in electronic health record (EHR) systems. In this study, a method is presented to preprocess chief complaints and assign corresponding ICD-10-CM codes using the MetaMap natural language processing (NLP) system and Unified Medical Language System (UMLS) Metathesaurus. An exploratory analysis was conducted using a set of 7,942 unique chief complaints from the statewide health information exchange containing EHR data from hospitals across Rhode Island. An evaluation of the proposed method was then performed using a set of 123,086 chief complaints with corresponding ICD-10-CM encounter diagnoses. With 87.82% of MetaMap-extracted concepts correctly assigned, the preliminary findings support the potential use of the method explored in this study for improving upon existing NLP techniques for enabling use of data captured within chief complaints to support clinical care, research, and public health surveillance. ©2020 AMIA - All rights reserved.

Mesh:

Year:  2021        PMID: 33936438      PMCID: PMC8075463     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  13 in total

1.  Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program.

Authors:  A R Aronson
Journal:  Proc AMIA Symp       Date:  2001

2.  An overview of MetaMap: historical perspective and recent advances.

Authors:  Alan R Aronson; François-Michel Lang
Journal:  J Am Med Inform Assoc       Date:  2010 May-Jun       Impact factor: 4.497

3.  Classifying free-text triage chief complaints into syndromic categories with natural language processing.

Authors:  Wendy W Chapman; Lee M Christensen; Michael M Wagner; Peter J Haug; Oleg Ivanov; John N Dowling; Robert T Olszewski
Journal:  Artif Intell Med       Date:  2005-01       Impact factor: 5.326

4.  Should we be worried? Investigation of signals generated by an electronic syndromic surveillance system--Westchester County, New York.

Authors:  William Terry; B Ostrowsky; A Huang
Journal:  MMWR Suppl       Date:  2004-09-24

5.  Coded Chief Complaints--automated analysis of free-text complaints.

Authors:  David A Thompson; David Eitel; Christopher M B Fernandes; Jesse M Pines; James Amsterdam; Steven J Davidson
Journal:  Acad Emerg Med       Date:  2006-05-24       Impact factor: 3.451

6.  Characterizing the use and contents of free-text family history comments in the Electronic Health Record.

Authors:  Elizabeth S Chen; Genevieve B Melton; Timothy E Burdick; Paul T Rosenau; Indra Neil Sarkar
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

Review 7.  Using chief complaints for syndromic surveillance: a review of chief complaint based classifiers in North America.

Authors:  Mike Conway; John N Dowling; Wendy W Chapman
Journal:  J Biomed Inform       Date:  2013-04-17       Impact factor: 6.317

8.  CCMapper: An adaptive NLP-based free-text chief complaint mapping algorithm.

Authors:  Mohammad Samie Tootooni; Kalyan S Pasupathy; Heather A Heaton; Casey M Clements; Mustafa Y Sir
Journal:  Comput Biol Med       Date:  2019-08-21       Impact factor: 4.589

Review 9.  Natural language processing systems for capturing and standardizing unstructured clinical information: A systematic review.

Authors:  Kory Kreimeyer; Matthew Foster; Abhishek Pandey; Nina Arya; Gwendolyn Halford; Sandra F Jones; Richard Forshee; Mark Walderhaug; Taxiarchis Botsis
Journal:  J Biomed Inform       Date:  2017-07-17       Impact factor: 6.317

10.  CLAMP - a toolkit for efficiently building customized clinical natural language processing pipelines.

Authors:  Ergin Soysal; Jingqi Wang; Min Jiang; Yonghui Wu; Serguei Pakhomov; Hongfang Liu; Hua Xu
Journal:  J Am Med Inform Assoc       Date:  2018-03-01       Impact factor: 4.497

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.