Literature DB >> 33936434

Patient-Specific Modeling with Personalized Decision Paths.

Adriana Johnson1, Gregory F Cooper1,2, Shyam Visweswaran1,2.   

Abstract

Predictive models can be useful in predicting patient outcomes under uncertainty. Many algorithms employ "population" methods, which optimize a single model to perform well on average over an entire population, but the model may perform poorly on some patients. Personalized methods optimize predictive performance for each patient by tailoring the model to the individual. We present a new personalized method based on decision trees: the Personalized Decision Path using a Bayesian score (PDP-Bay). Performance on eight synthetic, genomic, and clinical datasets was compared to that of decision trees and a previously described personalized decision path method in terms of area under the ROC curve (AUC) and expected calibration error (ECE). Model complexity was measured by average path length. The PDP-Bay model outperformed the decision tree in terms of both AUC and ECE. The results support the conclusion that personalization may achieve better predictive performance and produce simpler models than population approaches. ©2020 AMIA - All rights reserved.

Entities:  

Mesh:

Year:  2021        PMID: 33936434      PMCID: PMC8075540     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  9 in total

1.  Learning patient-specific predictive models from clinical data.

Authors:  Shyam Visweswaran; Derek C Angus; Margaret Hsieh; Lisa Weissfeld; Donald Yealy; Gregory F Cooper
Journal:  J Biomed Inform       Date:  2010-05-05       Impact factor: 6.317

2.  A prediction rule to identify low-risk patients with heart failure.

Authors:  Thomas E Auble; Margaret Hsieh; William Gardner; Gregory F Cooper; Roslyn A Stone; Julie B McCausland; Donald M Yealy
Journal:  Acad Emerg Med       Date:  2005-06       Impact factor: 3.451

3.  Obtaining Well Calibrated Probabilities Using Bayesian Binning.

Authors:  Mahdi Pakdaman Naeini; Gregory F Cooper; Milos Hauskrecht
Journal:  Proc Conf AAAI Artif Intell       Date:  2015-01

4.  Processes and outcomes of care for patients with community-acquired pneumonia: results from the Pneumonia Patient Outcomes Research Team (PORT) cohort study.

Authors:  M J Fine; R A Stone; D E Singer; C M Coley; T J Marrie; J R Lave; L J Hough; D S Obrosky; R Schulz; E M Ricci; J C Rogers; W N Kapoor
Journal:  Arch Intern Med       Date:  1999-05-10

5.  Decision path models for patient-specific modeling of patient outcomes.

Authors:  Antonio Ferreira; Gregory F Cooper; Shyam Visweswaran
Journal:  AMIA Annu Symp Proc       Date:  2013-11-16

6.  Multicenter approach to recurrent acute and chronic pancreatitis in the United States: the North American Pancreatitis Study 2 (NAPS2).

Authors:  David C Whitcomb; Dhiraj Yadav; Slivka Adam; Robert H Hawes; Randall E Brand; Michelle A Anderson; Mary E Money; Peter A Banks; Michele D Bishop; John Baillie; Stuart Sherman; James DiSario; Frank R Burton; Timothy B Gardner; Stephen T Amann; Andres Gelrud; Simon K Lo; Mark T DeMeo; William M Steinberg; Michael L Kochman; Babak Etemad; Christopher E Forsmark; Beth Elinoff; Julia B Greer; Michael O'Connell; Janette Lamb; M Michael Barmada
Journal:  Pancreatology       Date:  2008-09-03       Impact factor: 3.996

7.  Understanding the inflammatory cytokine response in pneumonia and sepsis: results of the Genetic and Inflammatory Markers of Sepsis (GenIMS) Study.

Authors:  John A Kellum; Lan Kong; Mitchell P Fink; Lisa A Weissfeld; Donald M Yealy; Michael R Pinsky; Jonathan Fine; Alexander Krichevsky; Russell L Delude; Derek C Angus
Journal:  Arch Intern Med       Date:  2007 Aug 13-27

8.  pROC: an open-source package for R and S+ to analyze and compare ROC curves.

Authors:  Xavier Robin; Natacha Turck; Alexandre Hainard; Natalia Tiberti; Frédérique Lisacek; Jean-Charles Sanchez; Markus Müller
Journal:  BMC Bioinformatics       Date:  2011-03-17       Impact factor: 3.307

9.  Personalized Modeling for Prediction with Decision-Path Models.

Authors:  Shyam Visweswaran; Antonio Ferreira; Guilherme A Ribeiro; Alexandre C Oliveira; Gregory F Cooper
Journal:  PLoS One       Date:  2015-06-22       Impact factor: 3.240

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.