Literature DB >> 33929957

Results of the 2020 fastMRI Challenge for Machine Learning MR Image Reconstruction.

Matthew J Muckley, Bruno Riemenschneider, Alireza Radmanesh, Sunwoo Kim, Geunu Jeong, Jingyu Ko, Yohan Jun, Hyungseob Shin, Dosik Hwang, Mahmoud Mostapha, Simon Arberet, Dominik Nickel, Zaccharie Ramzi, Philippe Ciuciu, Jean-Luc Starck, Jonas Teuwen, Dimitrios Karkalousos, Chaoping Zhang, Anuroop Sriram, Zhengnan Huang, Nafissa Yakubova, Yvonne W Lui, Florian Knoll.   

Abstract

Accelerating MRI scans is one of the principal outstanding problems in the MRI research community. Towards this goal, we hosted the second fastMRI competition targeted towards reconstructing MR images with subsampled k-space data. We provided participants with data from 7,299 clinical brain scans (de-identified via a HIPAA-compliant procedure by NYU Langone Health), holding back the fully-sampled data from 894 of these scans for challenge evaluation purposes. In contrast to the 2019 challenge, we focused our radiologist evaluations on pathological assessment in brain images. We also debuted a new Transfer track that required participants to submit models evaluated on MRI scanners from outside the training set. We received 19 submissions from eight different groups. Results showed one team scoring best in both SSIM scores and qualitative radiologist evaluations. We also performed analysis on alternative metrics to mitigate the effects of background noise and collected feedback from the participants to inform future challenges. Lastly, we identify common failure modes across the submissions, highlighting areas of need for future research in the MRI reconstruction community.

Entities:  

Year:  2021        PMID: 33929957     DOI: 10.1109/TMI.2021.3075856

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  10 in total

1.  The difficulty of computing stable and accurate neural networks: On the barriers of deep learning and Smale's 18th problem.

Authors:  Matthew J Colbrook; Vegard Antun; Anders C Hansen
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-16       Impact factor: 12.779

2.  Improving high frequency image features of deep learning reconstructions via k-space refinement with null-space kernel.

Authors:  Kanghyun Ryu; Cagan Alkan; Shreyas S Vasanawala
Journal:  Magn Reson Med       Date:  2022-04-15       Impact factor: 3.737

3.  Highly accelerated 3D MPRAGE using deep neural network-based reconstruction for brain imaging in children and young adults.

Authors:  Woojin Jung; JeeYoung Kim; Jingyu Ko; Geunu Jeong; Hyun Gi Kim
Journal:  Eur Radiol       Date:  2022-03-22       Impact factor: 7.034

4.  Residual RAKI: A hybrid linear and non-linear approach for scan-specific k-space deep learning.

Authors:  Chi Zhang; Steen Moeller; Omer Burak Demirel; Kâmil Uğurbil; Mehmet Akçakaya
Journal:  Neuroimage       Date:  2022-04-27       Impact factor: 7.400

5.  B-Spline Parameterized Joint Optimization of Reconstruction and K-Space Trajectories (BJORK) for Accelerated 2D MRI.

Authors:  Guanhua Wang; Tianrui Luo; Jon-Fredrik Nielsen; Douglas C Noll; Jeffrey A Fessler
Journal:  IEEE Trans Med Imaging       Date:  2022-08-31       Impact factor: 11.037

6.  Implicit data crimes: Machine learning bias arising from misuse of public data.

Authors:  Efrat Shimron; Jonathan I Tamir; Ke Wang; Michael Lustig
Journal:  Proc Natl Acad Sci U S A       Date:  2022-03-21       Impact factor: 12.779

7.  Revisiting [Formula: see text]-wavelet compressed-sensing MRI in the era of deep learning.

Authors:  Hongyi Gu; Burhaneddin Yaman; Steen Moeller; Jutta Ellermann; Kamil Ugurbil; Mehmet Akçakaya
Journal:  Proc Natl Acad Sci U S A       Date:  2022-08-08       Impact factor: 12.779

8.  Multi-Coil MRI Reconstruction Challenge-Assessing Brain MRI Reconstruction Models and Their Generalizability to Varying Coil Configurations.

Authors:  Youssef Beauferris; Jonas Teuwen; Dimitrios Karkalousos; Nikita Moriakov; Matthan Caan; George Yiasemis; Lívia Rodrigues; Alexandre Lopes; Helio Pedrini; Letícia Rittner; Maik Dannecker; Viktor Studenyak; Fabian Gröger; Devendra Vyas; Shahrooz Faghih-Roohi; Amrit Kumar Jethi; Jaya Chandra Raju; Mohanasankar Sivaprakasam; Mike Lasby; Nikita Nogovitsyn; Wallace Loos; Richard Frayne; Roberto Souza
Journal:  Front Neurosci       Date:  2022-07-06       Impact factor: 5.152

9.  An End-to-End Recurrent Neural Network for Radial MR Image Reconstruction.

Authors:  Changheun Oh; Jun-Young Chung; Yeji Han
Journal:  Sensors (Basel)       Date:  2022-09-26       Impact factor: 3.847

10.  A multispeaker dataset of raw and reconstructed speech production real-time MRI video and 3D volumetric images.

Authors:  Yongwan Lim; Asterios Toutios; Yannick Bliesener; Ye Tian; Sajan Goud Lingala; Colin Vaz; Tanner Sorensen; Miran Oh; Sarah Harper; Weiyi Chen; Yoonjeong Lee; Johannes Töger; Mairym Lloréns Monteserin; Caitlin Smith; Bianca Godinez; Louis Goldstein; Dani Byrd; Krishna S Nayak; Shrikanth S Narayanan
Journal:  Sci Data       Date:  2021-07-20       Impact factor: 6.444

  10 in total

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