Literature DB >> 33927972

Transcriptome sequencing revealed the mechanism of promoting floret opening by exogenous methyl jasmonate in sorghum.

Suifei Liu1,2, Yongming He1, Yongqi Fu1, Xiaochun Zeng1,3.   

Abstract

Flowering time is a critical trait reflecting the adaptation of plants to their environments. Our initial research has shown that exogenous methyl jasmonate (MeJA) significantly promoted the floret opening of sorghum. To better understand the mechanism of this phenomenon in sorghum, the comparative transcriptome analysis was performed. Transcriptomic analysis showed that the most number of differentially expressed genes was presented between control plants and plants treated with 2.0 mM exogenous MeJA in 2.5 h. A large number of differentially expressed genes were assigned to the subcategory of carbohydrate metabolism and lipid metabolism. The transcriptomic analysis of differentially expressed genes involved in glycolysis/gluconeogenesis and tricarboxylic acid cycle indicated a close relationship between carbohydrates metabolism and flowering. In addition, potassium uptake proteins and aquaporins also played important role in response to the exogenous MeJA in the flowering process. These results provide insights into the effect of MeJA on flowering time and explore the possible molecular mechanism of advancing the flowering period by spraying MeJA. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13205-021-02743-6. © King Abdulaziz City for Science and Technology 2021.

Entities:  

Keywords:  Carbohydrate metabolism; Comparative transcriptome; Methyl jasmonate; Sorghum

Year:  2021        PMID: 33927972      PMCID: PMC7981369          DOI: 10.1007/s13205-021-02743-6

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.406


  30 in total

1.  The Jasmonate ZIM-domain protein gene SlJAZ2 regulates plant morphology and accelerates flower initiation in Solanum lycopersicum plants.

Authors:  Xiaohui Yu; Guoping Chen; Boyan Tang; Jianling Zhang; Shengen Zhou; Zongli Hu
Journal:  Plant Sci       Date:  2017-11-21       Impact factor: 4.729

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Authors:  M Ohto; K Onai; Y Furukawa; E Aoki; T Araki; K Nakamura
Journal:  Plant Physiol       Date:  2001-09       Impact factor: 8.340

3.  Pollen tubes lacking a pair of K+ transporters fail to target ovules in Arabidopsis.

Authors:  Yongxian Lu; Salil Chanroj; Lalu Zulkifli; Mark A Johnson; Nobuyuki Uozumi; Alice Cheung; Heven Sze
Journal:  Plant Cell       Date:  2011-01-14       Impact factor: 11.277

4.  Jasmonic acid facilitates flower opening and floral organ development through the upregulated expression of SlMYB21 transcription factor in tomato.

Authors:  Tomoko Niwa; Takamasa Suzuki; Yumiko Takebayashi; Rie Ishiguro; Tetsuya Higashiyama; Hitoshi Sakakibara; Sumie Ishiguro
Journal:  Biosci Biotechnol Biochem       Date:  2018-02       Impact factor: 2.043

5.  The Sorghum bicolor genome and the diversification of grasses.

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Journal:  Nature       Date:  2009-01-29       Impact factor: 49.962

6.  Deep sequencing analysis of transcriptomes in Aspergillus oryzae in response to salinity stress.

Authors:  Bin He; Long Ma; Zhihong Hu; Haoran Li; Mingqiang Ai; Chuannan Long; Bin Zeng
Journal:  Appl Microbiol Biotechnol       Date:  2017-11-03       Impact factor: 4.813

7.  RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome.

Authors:  Bo Li; Colin N Dewey
Journal:  BMC Bioinformatics       Date:  2011-08-04       Impact factor: 3.307

8.  Retrospective genomic analysis of sorghum adaptation to temperate-zone grain production.

Authors:  Carrie S Thurber; Justin M Ma; Race H Higgins; Patrick J Brown
Journal:  Genome Biol       Date:  2013-06-26       Impact factor: 13.583

9.  The GOA database: gene Ontology annotation updates for 2015.

Authors:  Rachael P Huntley; Tony Sawford; Prudence Mutowo-Meullenet; Aleksandra Shypitsyna; Carlos Bonilla; Maria J Martin; Claire O'Donovan
Journal:  Nucleic Acids Res       Date:  2014-11-06       Impact factor: 19.160

10.  KEGG for linking genomes to life and the environment.

Authors:  Minoru Kanehisa; Michihiro Araki; Susumu Goto; Masahiro Hattori; Mika Hirakawa; Masumi Itoh; Toshiaki Katayama; Shuichi Kawashima; Shujiro Okuda; Toshiaki Tokimatsu; Yoshihiro Yamanishi
Journal:  Nucleic Acids Res       Date:  2007-12-12       Impact factor: 16.971

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