Literature DB >> 33926089

Identification of a Homozygous PEX26 Mutation in a Heimler Syndrome Patient.

Youn Jung Kim1, Yuichi Abe2, Young-Jae Kim3, Yukio Fujiki2,4, Jung-Wook Kim1,3.   

Abstract

This study aimed to identify the molecular genetic etiology of an 8-year-old boy with amelogenesis imperfecta in permanent dentition. Bilateral cochlear implants were placed due to sensorineural hearing loss, and there was no other family member with a similar phenotype. Peripheral blood samples were collected with the understanding and written consent of the participating family members. A constitutional chromosome study was performed for the proband. Genomic DNA was isolated, and whole exome sequencing was performed. A series of bioinformatic analyses were performed with the obtained paired-end sequencing reads, and the variants were filtered and annotated with dbSNP147. There was no abnormality in the constitutional chromosome study. Whole exome sequencing analysis with trio samples identified a homozygous mutation (c.506T>C, p. (Leu169Pro)) in the PEX26 gene. We verified "temperature sensitivity (ts)" of patient-derived Pex26-L169P by expression in pex26 CHO mutant ZP167 cells to determine the effect of the L169P mutation on Pex26 function. The L169P mutation causes a mild ts-cellular phenotype representing the decreased peroxisomal import of catalase. This study supports the finding that the recessive mutations in PEX26 are associated with Heimler syndrome and demonstrates the importance of an early and correct diagnosis.

Entities:  

Keywords:  Heimler syndrome; PEX26; amelogenesis imperfecta; hearing loss; temperature sensitivity; whole exome sequencing

Year:  2021        PMID: 33926089     DOI: 10.3390/genes12050646

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  26 in total

1.  A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data.

Authors:  Heng Li
Journal:  Bioinformatics       Date:  2011-09-08       Impact factor: 6.937

2.  The peroxin Pex14p. cDNA cloning by functional complementation on a Chinese hamster ovary cell mutant, characterization, and functional analysis.

Authors:  N Shimizu; R Itoh; Y Hirono; H Otera; K Ghaedi; K Tateishi; S Tamura; K Okumoto; T Harano; S Mukai; Y Fujiki
Journal:  J Biol Chem       Date:  1999-04-30       Impact factor: 5.157

3.  Functional domains and dynamic assembly of the peroxin Pex14p, the entry site of matrix proteins.

Authors:  Ryota Itoh; Yukio Fujiki
Journal:  J Biol Chem       Date:  2006-02-02       Impact factor: 5.157

4.  The pathogenic peroxin Pex26p recruits the Pex1p-Pex6p AAA ATPase complexes to peroxisomes.

Authors:  Naomi Matsumoto; Shigehiko Tamura; Yukio Fujiki
Journal:  Nat Cell Biol       Date:  2003-05       Impact factor: 28.824

5.  ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.

Authors:  Kai Wang; Mingyao Li; Hakon Hakonarson
Journal:  Nucleic Acids Res       Date:  2010-07-03       Impact factor: 16.971

6.  Mutations in novel peroxin gene PEX26 that cause peroxisome-biogenesis disorders of complementation group 8 provide a genotype-phenotype correlation.

Authors:  Naomi Matsumoto; Shigehiko Tamura; Satomi Furuki; Non Miyata; Ann Moser; Nobuyuki Shimozawa; Hugo W Moser; Yasuyuki Suzuki; Naomi Kondo; Yukio Fujiki
Journal:  Am J Hum Genet       Date:  2003-07-08       Impact factor: 11.025

7.  Isolation and characterization of Chinese hamster ovary cell mutants defective in assembly of peroxisomes.

Authors:  T Tsukamoto; S Yokota; Y Fujiki
Journal:  J Cell Biol       Date:  1990-03       Impact factor: 10.539

8.  Spectrum of PEX1 and PEX6 variants in Heimler syndrome.

Authors:  Claire E L Smith; James A Poulter; Alex V Levin; Jenina E Capasso; Susan Price; Tamar Ben-Yosef; Reuven Sharony; William G Newman; Roger C Shore; Steven J Brookes; Alan J Mighell; Chris F Inglehearn
Journal:  Eur J Hum Genet       Date:  2016-06-15       Impact factor: 4.246

9.  The VDAC2-BAK axis regulates peroxisomal membrane permeability.

Authors:  Ken-Ichiro Hosoi; Non Miyata; Satoru Mukai; Satomi Furuki; Kanji Okumoto; Emily H Cheng; Yukio Fujiki
Journal:  J Cell Biol       Date:  2017-02-07       Impact factor: 10.539

10.  Heimler Syndrome Is Caused by Hypomorphic Mutations in the Peroxisome-Biogenesis Genes PEX1 and PEX6.

Authors:  Ilham Ratbi; Kim D Falkenberg; Manou Sommen; Nada Al-Sheqaih; Soukaina Guaoua; Geert Vandeweyer; Jill E Urquhart; Kate E Chandler; Simon G Williams; Neil A Roberts; Mustapha El Alloussi; Graeme C Black; Sacha Ferdinandusse; Hind Ramdi; Audrey Heimler; Alan Fryer; Sally-Ann Lynch; Nicola Cooper; Kai Ren Ong; Claire E L Smith; Christopher F Inglehearn; Alan J Mighell; Claire Elcock; James A Poulter; Marc Tischkowitz; Sally J Davies; Abdelaziz Sefiani; Aleksandr A Mironov; William G Newman; Hans R Waterham; Guy Van Camp
Journal:  Am J Hum Genet       Date:  2015-09-17       Impact factor: 11.025

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