Literature DB >> 33925572

Genome-Wide Identification and Expression Analyses of AnSnRK2 Gene Family under Osmotic Stress in Ammopiptanthus nanus.

Yueming Tang1, Fengzhong Lu1, Wenqi Feng1, Yuan Liu1, Yang Cao1, Wanchen Li1, Fengling Fu1, Haoqiang Yu1.   

Abstract

Sucrose non-fermenting-1 (SNF1)-related protein kinase 2's (SnRK2s) are plant-specific serine/threonine protein kinases and play crucial roles in the abscisic acid signaling pathway and abiotic stress response. Ammopiptanthus nanus is a relict xerophyte shrub and extremely tolerant of abiotic stresses. Therefore, we performed genome-wide identification of the AnSnRK2 genes and analyzed their expression profiles under osmotic stresses including drought and salinity. A total of 11 AnSnRK2 genes (AnSnRK2.1-AnSnRK2.11) were identified in the A. nanus genome and were divided into three groups according to the phylogenetic tree. The AnSnRK2.6 has seven introns and others have eight introns. All of the AnSnRK2 proteins are highly conserved at the N-terminus and contain similar motif composition. The result of cis-acting element analysis showed that there were abundant hormone- and stress-related cis-elements in the promoter regions of AnSnRK2s. Moreover, the results of quantitative real-time PCR exhibited that the expression of most AnSnRK2s was induced by NaCl and PEG-6000 treatments, but the expression of AnSnRK2.3 and AnSnRK2.6 was inhibited, suggesting that the AnSnRK2s might play key roles in stress tolerance. The study provides insights into understanding the function of AnSnRK2s.

Entities:  

Keywords:  Ammopiptanthus nanus; SnRK2; expression profiles; osmotic stress; protein kinase

Year:  2021        PMID: 33925572     DOI: 10.3390/plants10050882

Source DB:  PubMed          Journal:  Plants (Basel)        ISSN: 2223-7747


  53 in total

1.  Overexpression of a phospholipase Dα gene from Ammopiptanthus nanus enhances salt tolerance of phospholipase Dα1-deficient Arabidopsis mutant.

Authors:  Hao Qiang Yu; Tai Ming Yong; Hong Jie Li; Yan Ping Liu; Shu Feng Zhou; Feng Ling Fu; Wan Chen Li
Journal:  Planta       Date:  2015-08-30       Impact factor: 4.116

Review 2.  Osmotic signaling in plants: multiple pathways mediated by emerging kinase families.

Authors:  Marie Boudsocq; Christiane Laurière
Journal:  Plant Physiol       Date:  2005-07       Impact factor: 8.340

3.  Three SnRK2 protein kinases are the main positive regulators of abscisic acid signaling in response to water stress in Arabidopsis.

Authors:  Yasunari Fujita; Kazuo Nakashima; Takuya Yoshida; Takeshi Katagiri; Satoshi Kidokoro; Norihito Kanamori; Taishi Umezawa; Miki Fujita; Kyonoshin Maruyama; Kanako Ishiyama; Masatomo Kobayashi; Shoko Nakasone; Kohji Yamada; Takuya Ito; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  Plant Cell Physiol       Date:  2009-12       Impact factor: 4.927

4.  The abscisic acid-responsive kinase PKABA1 interacts with a seed-specific abscisic acid response element-binding factor, TaABF, and phosphorylates TaABF peptide sequences.

Authors:  Russell R Johnson; Ryan L Wagner; Steven D Verhey; Mary K Walker-Simmons
Journal:  Plant Physiol       Date:  2002-10       Impact factor: 8.340

5.  Two calcium-dependent protein kinases, CPK4 and CPK11, regulate abscisic acid signal transduction in Arabidopsis.

Authors:  Sai-Yong Zhu; Xiang-Chun Yu; Xiao-Jing Wang; Rui Zhao; Yan Li; Ren-Chun Fan; Yi Shang; Shu-Yuan Du; Xiao-Fang Wang; Fu-Qing Wu; Yan-Hong Xu; Xiao-Yan Zhang; Da-Peng Zhang
Journal:  Plant Cell       Date:  2007-10-05       Impact factor: 11.277

6.  Cloning and characterization of the SnRK2 gene family from Zea mays.

Authors:  Junling Huai; Meng Wang; Junguang He; Jun Zheng; Zhigang Dong; Hongkun Lv; Jinfeng Zhao; Guoying Wang
Journal:  Plant Cell Rep       Date:  2008-09-17       Impact factor: 4.570

7.  Genetics and phosphoproteomics reveal a protein phosphorylation network in the abscisic acid signaling pathway in Arabidopsis thaliana.

Authors:  Taishi Umezawa; Naoyuki Sugiyama; Fuminori Takahashi; Jeffrey C Anderson; Yasushi Ishihama; Scott C Peck; Kazuo Shinozaki
Journal:  Sci Signal       Date:  2013-04-09       Impact factor: 8.192

8.  Identification of mitogen-activated protein kinase kinase gene family and MKK-MAPK interaction network in maize.

Authors:  Xiangpei Kong; Jiaowen Pan; Dan Zhang; Shanshan Jiang; Guohua Cai; Li Wang; Dequan Li
Journal:  Biochem Biophys Res Commun       Date:  2013-11-09       Impact factor: 3.575

9.  Long-read sequencing and de novo genome assembly of Ammopiptanthus nanus, a desert shrub.

Authors:  Fei Gao; Xue Wang; Xuming Li; Mingyue Xu; Huayun Li; Merhaba Abla; Huigai Sun; Shanjun Wei; Jinchao Feng; Yijun Zhou
Journal:  Gigascience       Date:  2018-07-01       Impact factor: 6.524

10.  A wheat protein kinase gene TaSnRK2.9-5A associated with yield contributing traits.

Authors:  Shoaib Ur Rehman; Jingyi Wang; Xiaoping Chang; Xueyong Zhang; Xinguo Mao; Ruilian Jing
Journal:  Theor Appl Genet       Date:  2018-12-05       Impact factor: 5.699

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