Literature DB >> 33920185

Long Non-Coding PROX1-AS1 Expression Correlates with Renal Cell Carcinoma Metastasis and Aggressiveness.

Magdalena Rudzinska1, Karolina H Czarnecka-Chrebelska2, Ekaterina B Kuznetsova1,3, Sofya V Maryanchik1, Alessandro Parodi1, Dmitry O Korolev4, Nataliya Potoldykova4, Yulia Svetikova4, Andrey Z Vinarov4, Marina V Nemtsova1,3, Andrey A Zamyatnin1,5,6.   

Abstract

Long non-coding RNAs (lncRNAs) can be specifically expressed in different tissues and cancers. By controlling the gene expression at the transcriptional and translational levels, lncRNAs have been reported to be involved in tumor growth and metastasis. Recent data demonstrated that multiple lncRNAs have a crucial role in renal cell carcinoma (RCC) progression-the most common malignant urogenital tumor. In the present study, we found a trend towards increased PROX1 antisense RNA 1 (PROX1-AS1) expression in RCC specimens compared to non-tumoral margins. Next, we found a positive correlation between PROX1-AS1 expression and the occurrence of distant and lymph node metastasis, higher tumor stage (pT1 vs. pT2 vs. pT3-T4) and high-grade (G1/G2 vs. G3/G4) clear RCC. Furthermore, global demethylation in RCC-derived cell lines (769-P and A498) and human embryonic kidney 293 (HEK293) cells induced a significant increase of PROX1-AS1 expression level, with the most remarkable change in HEK293 cells. In line with this evidence, bisulfite sequencing analysis confirmed the specific demethylation of bioinformatically selected CpG islands on the PROX1-AS1 promoter sequence in the HEK293 cell line but not in the tumor cells. Additionally, the human specimen analysis showed the hemimethylated state of CG dinucleotides in non-tumor kidney tissues, whereas the tumor samples presented the complete, partial, or no demethylation of CpG-islands. In conclusion, our study indicated that PROX1-AS1 could be associated with RCC progression, and further investigations may define its role as a new diagnostic marker and therapeutic target.

Entities:  

Keywords:  PROX1-AS1; human specimens; non-coding RNA; renal cell carcinoma

Year:  2021        PMID: 33920185     DOI: 10.3390/ncrna7020025

Source DB:  PubMed          Journal:  Noncoding RNA        ISSN: 2311-553X


  54 in total

Review 1.  Long noncoding RNAs: past, present, and future.

Authors:  Johnny T Y Kung; David Colognori; Jeannie T Lee
Journal:  Genetics       Date:  2013-03       Impact factor: 4.562

Review 2.  Review of renal cell carcinoma and its common subtypes in radiology.

Authors:  Gavin Low; Guan Huang; Winnie Fu; Zaahir Moloo; Safwat Girgis
Journal:  World J Radiol       Date:  2016-05-28

3.  Early growth response protein-1 upregulates long noncoding RNA Arid2-IR to promote extracellular matrix production in diabetic kidney disease.

Authors:  Yan-Lin Yang; Fang Hu; Meng Xue; Yi-Jie Jia; Zong-Ji Zheng; Yang Li; Yao-Ming Xue
Journal:  Am J Physiol Cell Physiol       Date:  2018-11-21       Impact factor: 4.249

4.  Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling.

Authors:  Karam Aboudehen; Shayan Farahani; Mohammed Kanchwala; Siu Chiu Chan; Svetlana Avdulov; Alan Mickelson; Dayeon Lee; Micah D Gearhart; Vishal Patel; Chao Xing; Peter Igarashi
Journal:  J Biol Chem       Date:  2018-05-01       Impact factor: 5.157

5.  Impact of an altered PROX1 expression on clinicopathology, prognosis and progression in renal cell carcinoma.

Authors:  Tao Lv; Yanfeng Liu; Jianping Zhang; Le Xu; Yu Zhu; Hankun Yin; Huimin An; Zongming Lin; Youhua Xie; Lian Chen
Journal:  PLoS One       Date:  2014-05-05       Impact factor: 3.240

Review 6.  Alteration of Epigenetic Regulation by Long Noncoding RNAs in Cancer.

Authors:  Mariangela Morlando; Alessandro Fatica
Journal:  Int J Mol Sci       Date:  2018-02-14       Impact factor: 5.923

7.  Genome‑wide DNA methylation regulation analysis of long non‑coding RNAs in glioblastoma.

Authors:  Jianghuai Ji; Lei Zhao; Xiaoxiao Zhao; Qianpeng Li; Yi An; Li Li; Dongguo Li
Journal:  Int J Mol Med       Date:  2020-04-15       Impact factor: 4.101

8.  Energy stress-induced lncRNA FILNC1 represses c-Myc-mediated energy metabolism and inhibits renal tumor development.

Authors:  Zhen-Dong Xiao; Leng Han; Hyemin Lee; Li Zhuang; Yilei Zhang; Joelle Baddour; Deepak Nagrath; Christopher G Wood; Jian Gu; Xifeng Wu; Han Liang; Boyi Gan
Journal:  Nat Commun       Date:  2017-10-04       Impact factor: 14.919

9.  Long non-coding RNA TCL6 enhances preferential toxicity of paclitaxel to renal cell carcinoma cells.

Authors:  Zhizhao Chen; Quan Zhuang; Ke Cheng; Yingzi Ming; Yujun Zhao; Qifa Ye; Sheng Zhang
Journal:  J Cancer       Date:  2020-01-01       Impact factor: 4.207

10.  RNAcentral 2021: secondary structure integration, improved sequence search and new member databases.

Authors: 
Journal:  Nucleic Acids Res       Date:  2021-01-08       Impact factor: 16.971

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