Literature DB >> 33914608

Multi-Omics Approaches to Define Calcific Aortic Valve Disease Pathogenesis.

Mark C Blaser1, Simon Kraler2, Thomas F Lüscher2,3,4, Elena Aikawa1,5.   

Abstract

Calcific aortic valve disease sits at the confluence of multiple world-wide epidemics of aging, obesity, diabetes, and renal dysfunction, and its prevalence is expected to nearly triple over the next 3 decades. This is of particularly dire clinical relevance, as calcific aortic valve disease can progress rapidly to aortic stenosis, heart failure, and eventually premature death. Unlike in atherosclerosis, and despite the heavy clinical toll, to date, no pharmacotherapy has proven effective to halt calcific aortic valve disease progression, with invasive and costly aortic valve replacement representing the only treatment option currently available. This substantial gap in care is largely because of our still-limited understanding of both normal aortic valve biology and the key regulatory mechanisms that drive disease initiation and progression. Drug discovery is further hampered by the inherent intricacy of the valvular microenvironment: a unique anatomic structure, a complex mixture of dynamic biomechanical forces, and diverse and multipotent cell populations collectively contributing to this currently intractable problem. One promising and rapidly evolving tactic is the application of multiomics approaches to fully define disease pathogenesis. Herein, we summarize the application of (epi)genomics, transcriptomics, proteomics, and metabolomics to the study of valvular heart disease. We also discuss recent forays toward the omics-based characterization of valvular (patho)biology at single-cell resolution; these efforts promise to shed new light on cellular heterogeneity in healthy and diseased valvular tissues and represent the potential to efficaciously target and treat key cell subpopulations. Last, we discuss systems biology- and network medicine-based strategies to extract meaning, mechanisms, and prioritized drug targets from multiomics datasets.

Entities:  

Keywords:  aortic stenosis; aortic valve disease; gene expression profiling; genomics; metabolomics; proteomics; systems biology

Mesh:

Year:  2021        PMID: 33914608      PMCID: PMC8095729          DOI: 10.1161/CIRCRESAHA.120.317979

Source DB:  PubMed          Journal:  Circ Res        ISSN: 0009-7330            Impact factor:   17.367


  197 in total

1.  P2Y2 receptor represses IL-6 expression by valve interstitial cells through Akt: implication for calcific aortic valve disease.

Authors:  Diala El Husseini; Marie-Chloé Boulanger; Ablajan Mahmut; Rihab Bouchareb; Marie-Hélène Laflamme; Dominique Fournier; Philippe Pibarot; Yohan Bossé; Patrick Mathieu
Journal:  J Mol Cell Cardiol       Date:  2014-03-11       Impact factor: 5.000

2.  Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets.

Authors:  Zhihong Zhu; Futao Zhang; Han Hu; Andrew Bakshi; Matthew R Robinson; Joseph E Powell; Grant W Montgomery; Michael E Goddard; Naomi R Wray; Peter M Visscher; Jian Yang
Journal:  Nat Genet       Date:  2016-03-28       Impact factor: 38.330

3.  Mechanosensitive microRNA-181b Regulates Aortic Valve Endothelial Matrix Degradation by Targeting TIMP3.

Authors:  Jack M Heath; Joan Fernandez Esmerats; Lucky Khambouneheuang; Sandeep Kumar; Rachel Simmons; Hanjoong Jo
Journal:  Cardiovasc Eng Technol       Date:  2017-02-24       Impact factor: 2.495

4.  Metabolic Modulation and Potential Biomarkers of the Prognosis Identification for Severe Aortic Stenosis after TAVR by a Metabolomics Study.

Authors:  Yanbiao Liao; Chang Liu; Tianyuan Xiong; Mingyue Zhao; Wen Zheng; Yuan Feng; Yijian Li; Yuanweixiang Ou; Zhengang Zhao; Yong Peng; Jiafu Wei; Qiao Li; Wei Meng; Xiaojing Liu; Mao Chen
Journal:  Cardiol Res Pract       Date:  2020-10-28       Impact factor: 1.866

5.  Role of oral bacterial flora in calcific aortic stenosis: an animal model.

Authors:  David J Cohen; David Malave; John J Ghidoni; Panagiotis Iakovidis; Mona M Everett; Shenghong You; Youhong Liu; Barbara D Boyan
Journal:  Ann Thorac Surg       Date:  2004-02       Impact factor: 4.330

6.  Animal models of calcific aortic valve disease.

Authors:  Krista L Sider; Mark C Blaser; Craig A Simmons
Journal:  Int J Inflam       Date:  2011-08-02

7.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

8.  Genesis and growth of extracellular-vesicle-derived microcalcification in atherosclerotic plaques.

Authors:  Joshua D Hutcheson; Claudia Goettsch; Sergio Bertazzo; Natalia Maldonado; Jessica L Ruiz; Wilson Goh; Katsumi Yabusaki; Tyler Faits; Carlijn Bouten; Gregory Franck; Thibaut Quillard; Peter Libby; Masanori Aikawa; Sheldon Weinbaum; Elena Aikawa
Journal:  Nat Mater       Date:  2016-01-11       Impact factor: 43.841

9.  Integrative multi-omics analysis of intestinal organoid differentiation.

Authors:  Rik Gh Lindeboom; Lisa van Voorthuijsen; Koen C Oost; Maria J Rodríguez-Colman; Maria V Luna-Velez; Cristina Furlan; Floriane Baraille; Pascal Wtc Jansen; Agnès Ribeiro; Boudewijn Mt Burgering; Hugo J Snippert; Michiel Vermeulen
Journal:  Mol Syst Biol       Date:  2018-06-26       Impact factor: 11.429

10.  MetaboAnalyst: a web server for metabolomic data analysis and interpretation.

Authors:  Jianguo Xia; Nick Psychogios; Nelson Young; David S Wishart
Journal:  Nucleic Acids Res       Date:  2009-05-08       Impact factor: 16.971

View more
  8 in total

Review 1.  Evaluating Medical Therapy for Calcific Aortic Stenosis: JACC State-of-the-Art Review.

Authors:  Brian R Lindman; Devraj Sukul; Marc R Dweck; Mahesh V Madhavan; Benoit J Arsenault; Megan Coylewright; W David Merryman; David E Newby; John Lewis; Frank E Harrell; Michael J Mack; Martin B Leon; Catherine M Otto; Philippe Pibarot
Journal:  J Am Coll Cardiol       Date:  2021-12-07       Impact factor: 24.094

2.  Calcific aortic valve disease: from molecular and cellular mechanisms to medical therapy.

Authors:  Simon Kraler; Mark C Blaser; Elena Aikawa; Giovanni G Camici; Thomas F Lüscher
Journal:  Eur Heart J       Date:  2022-02-12       Impact factor: 29.983

3.  Introduction to the Aortic Valve Disease Review Series.

Authors:  Rolando A Cuevas; Cynthia St Hilaire
Journal:  Circ Res       Date:  2021-04-29       Impact factor: 17.367

Review 4.  Uncoupling the Vicious Cycle of Mechanical Stress and Inflammation in Calcific Aortic Valve Disease.

Authors:  Nalin H Dayawansa; Sara Baratchi; Karlheinz Peter
Journal:  Front Cardiovasc Med       Date:  2022-03-09

5.  Purinergic Receptor P2Y2 Stimulation Averts Aortic Valve Interstitial Cell Calcification and Myofibroblastic Activation.

Authors:  Donato Moschetta; Enrico Di Maria; Vincenza Valerio; Ilaria Massaiu; Michele Bozzi; Paola Songia; Yuri D'alessandra; Veronika A Myasoedova; Paolo Poggio
Journal:  Biomedicines       Date:  2022-02-16

6.  Profiling Genome-Wide DNA Methylation Patterns in Human Aortic and Mitral Valves.

Authors:  Sarah Halawa; Najma Latif; Yuan-Tsan Tseng; Ayman M Ibrahim; Adrian H Chester; Ahmed Moustafa; Yasmine Aguib; Magdi H Yacoub
Journal:  Front Cardiovasc Med       Date:  2022-04-06

7.  Commentary: Nature versus nurture in unicuspid aortic valve aortopathy.

Authors:  Amine Mazine; Malak Elbatarny; Maral Ouzounian
Journal:  JTCVS Open       Date:  2021-11-04

8.  Integrated identification of key immune related genes and patterns of immune infiltration in calcified aortic valvular disease: A network based meta-analysis.

Authors:  Li-Da Wu; Feng Xiao; Jin-Yu Sun; Feng Li; Yu-Jia Chen; Jia-Yi Chen; Jie Zhang; Ling-Ling Qian; Ru-Xing Wang
Journal:  Front Genet       Date:  2022-09-21       Impact factor: 4.772

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.